RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.26□□□□□ -0.45
CSF1R-208ENST00000515239 RSRC2Q7L4I2 434 aaKnown RBP12.26□□□□□ -0.45
CSF1R-208ENST00000515239 CLEC14AQ86T13 490 aa12.26□□□□□ -0.45
CSF1R-208ENST00000515239 MAPK15Q8TD08 544 aa12.26□□□□□ -0.45
CSF1R-208ENST00000515239 PARD3BQ8TEW8 1205 aa12.26□□□□□ -0.45
CSF1R-208ENST00000515239 FAM131CQ96AQ9 280 aa12.26□□□□□ -0.45
CSF1R-208ENST00000515239 GRAMD1AQ96CP6 724 aa12.26□□□□□ -0.45
CSF1R-208ENST00000515239 CLIC6Q96NY7 704 aa12.26□□□□□ -0.45
CSF1R-208ENST00000515239 PSMG3-AS1Q96PY0 264 aa12.26□□□□□ -0.45
CSF1R-208ENST00000515239 KLHL11Q9NVR0 708 aa12.26□□□□□ -0.45
CSF1R-208ENST00000515239 SEPT3Q9UH03 358 aa12.26□□□□□ -0.45
CSF1R-208ENST00000515239 CYTH4Q9UIA0 394 aa12.26□□□□□ -0.45
CSF1R-208ENST00000515239 ATXN7L1Q9ULK2 861 aaPredicted RBP12.26□□□□□ -0.45
CSF1R-208ENST00000515239 DMTF1Q9Y222 760 aa12.26□□□□□ -0.45
CSF1R-208ENST00000515239 CA5BQ9Y2D0 317 aa12.26□□□□□ -0.45
CSF1R-208ENST00000515239 TDRD6O60522 2096 aaKnown RBP12.26□□□□□ -0.45
CSF1R-208ENST00000515239 A0A087X0B3 334 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 LRRIQ3A6PVS8 624 aaPredicted RBP12.25□□□□□ -0.45
CSF1R-208ENST00000515239 H3BQV1 296 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 RTN2O75298 545 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 KIF20AO95235 890 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 FAM87AP0C7U9 286 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 P4HA1P13674 534 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 DRD3P35462 400 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 PSMD8P48556 350 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 AP3M2P53677 418 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 INHBCP55103 352 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 YWHAGP61981 247 aaKnown RBP eCLIP12.25□□□□□ -0.45
CSF1R-208ENST00000515239 KCNMA1Q12791 1236 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 MPP7Q5T2T1 576 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 PIK3R6Q5UE93 754 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 SPOPLQ6IQ16 392 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 RFWD3Q6PCD5 774 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 STK40Q8N2I9 435 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 ARHGAP18Q8N392 663 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 KDM1BQ8NB78 822 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 FIBINQ8TAL6 211 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 PTPRN2Q92932 1015 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 SGF29Q96ES7 293 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 KLHDC7BQ96G42 594 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 ARHGAP9Q9BRR9 750 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 NT5C1AQ9BXI3 368 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 USP29Q9HBJ7 922 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 NLGN3Q9NZ94 848 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 SLCO3A1Q9UIG8 710 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 FBXO2Q9UK22 296 aaPredicted RBP12.25□□□□□ -0.45
CSF1R-208ENST00000515239 MAN2B2Q9Y2E5 1009 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 CREBBPQ92793 2442 aa12.25□□□□□ -0.45
CSF1R-208ENST00000515239 EDDM13A0A1B0GTR0 161 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 PRAMEF26H0Y7S4 382 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 NOBOXO60393 691 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 TBL1XO60907 577 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 PIAS2O75928 621 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 CLSTN1O94985 981 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 TNFSF15O95150 251 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 GJB6O95452 261 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 ADH1BP00325 375 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 ASLP04424 464 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 RPN1P04843 607 aaKnown RBP12.24□□□□□ -0.45
CSF1R-208ENST00000515239 THEGLP0DJG4 465 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 SFTPCP11686 197 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 NUDT1P36639 197 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 CSKP41240 450 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 CTSOP43234 321 aaPredicted RBP12.24□□□□□ -0.45
CSF1R-208ENST00000515239 METAP1P53582 386 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 SNRPFP62306 86 aaKnown RBP12.24□□□□□ -0.45
CSF1R-208ENST00000515239 INCA1Q0VD86 236 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 RAB41Q5JT25 222 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 PPP1R26Q5T8A7 1209 aaPredicted RBP12.24□□□□□ -0.45
CSF1R-208ENST00000515239 PM20D1Q6GTS8 502 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 ITIH6Q6UXX5 1313 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 USP53Q70EK8 1073 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 ARL14Q8N4G2 192 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 TMEM145Q8NBT3 493 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 IFI44Q8TCB0 444 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 NDRG1Q92597 394 aaKnown RBP12.24□□□□□ -0.45
CSF1R-208ENST00000515239 UBXN6Q9BZV1 441 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 KDM4CQ9H3R0 1056 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.24□□□□□ -0.45
CSF1R-208ENST00000515239 SFMBT1Q9UHJ3 866 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 ERVW-1Q9UQF0 538 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 HBS1LQ9Y450 684 aaKnown RBP12.24□□□□□ -0.45
CSF1R-208ENST00000515239 SRPRBQ9Y5M8 271 aaKnown RBP12.24□□□□□ -0.45
CSF1R-208ENST00000515239 CLIC4Q9Y696 253 aa12.24□□□□□ -0.45
CSF1R-208ENST00000515239 NBASA2RRP1 2371 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 GOLGA6L7A0A1B0GV03 622 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 K7ESM1 405 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 SCAMP1O15126 338 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 PLRG1O43660 514 aaKnown RBP12.23□□□□□ -0.45
CSF1R-208ENST00000515239 LATS1O95835 1130 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 ASS1P00966 412 aaKnown RBP12.23□□□□□ -0.45
CSF1R-208ENST00000515239 IL1BP01584 269 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 SLC6A4P31645 630 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 MLLT3P42568 568 aaPredicted RBP12.23□□□□□ -0.45
CSF1R-208ENST00000515239 DLG4P78352 724 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 SRSF6Q13247 344 aaKnown RBP12.23□□□□□ -0.45
CSF1R-208ENST00000515239 TGIF1Q15583 401 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 POM121L1PQ3SYA9 428 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 ZACNQ401N2 412 aa12.23□□□□□ -0.45
CSF1R-208ENST00000515239 FOXR1Q6PIV2 292 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms