RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	LIMA1	Q9UHB6	759 aa	Known RBP	7	□□□□□ -1.29
HIPK1-210	ENST00000514621	SFMBT1	Q9UHJ3	866 aa		7	□□□□□ -1.29
HIPK1-210	ENST00000514621	FRMD4B	Q9Y2L6	1034 aa		7	□□□□□ -1.29
HIPK1-210	ENST00000514621	SF3B1	O75533	1304 aa	Known RBP eCLIP	7	□□□□□ -1.29	9e-6	■■■■■ 68.9
HIPK1-210	ENST00000514621	TDRD15	B5MCY1	1934 aa	Known RBP	6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	PRRC2B	Q5JSZ5	2229 aa	Known RBP	6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	CCDC66	A2RUB6	948 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	LGALS16	A8MUM7	142 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	ACOT7	O00154	380 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	PER2	O15055	1255 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	MAPK13	O15264	365 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	SLC16A3	O15427	465 aa	Known RBP	6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	TEX33	O43247	280 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	TRAPPC3	O43617	180 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	FBXO21	O94952	628 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	PTMA	P06454	111 aa	Known RBP	6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	CKM	P06732	381 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	TPM3	P06753	285 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	TPM2	P07951	284 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	TNNI1	P19237	187 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	GJA4	P35212	333 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	PSMC2	P35998	433 aa	Known RBP	6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	GLUD2	P49448	558 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	AARS	P49588	968 aa	Known RBP eCLIP	6.99	□□□□□ -1.29	8e-6	■■■■■ 52.4
HIPK1-210	ENST00000514621	LILRA4	P59901	499 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	PFKP	Q01813	784 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	DSG1	Q02413	1049 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	ELAVL2	Q12926	359 aa	Known RBP	6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	SMC1A	Q14683	1233 aa	Known RBP	6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	BMS1	Q14692	1282 aa	Known RBP	6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	PTPN14	Q15678	1187 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	MAN2A1	Q16706	1144 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	USP41	Q3LFD5	358 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	FILIP1L	Q4L180	1135 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	FIGN	Q5HY92	759 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	C1orf220	Q5T0J3	134 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	TRMT10B	Q6PF06	316 aa	Known RBP	6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	FOXR2	Q6PJQ5	311 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	ADGRD2	Q7Z7M1	963 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	RBM23	Q86U06	439 aa	Known RBP	6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	CEP57	Q86XR8	500 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	WDR49	Q8IV35	697 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	FAM186B	Q8IYM0	893 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	LILRB2	Q8N423	598 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	MAFA	Q8NHW3	353 aa	Predicted RBP	6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	PARD3B	Q8TEW8	1205 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	PPM1E	Q8WY54	764 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	RIN2	Q8WYP3	895 aa	Predicted RBP	6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	BORCS6	Q96GS4	357 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	FNBP1	Q96RU3	617 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	CGRRF1	Q99675	332 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	TUBGCP2	Q9BSJ2	902 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	TTPAL	Q9BTX7	342 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	BDH2	Q9BUT1	245 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	KRTAP4-11	Q9BYQ6	195 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	MTMR12	Q9C0I1	747 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	MRPL17	Q9NRX2	175 aa	Known RBP	6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	RIC8B	Q9NVN3	520 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	SIX4	Q9UIU6	781 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	ITGA11	Q9UKX5	1188 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	CBLC	Q9ULV8	474 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	AGAP1	Q9UPQ3	857 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	ATP23	Q9Y6H3	246 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	DUSP10	Q9Y6W6	482 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	MYO7A	Q13402	2215 aa		6.99	□□□□□ -1.29
HIPK1-210	ENST00000514621	PLXNA4	Q9HCM2	1894 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	LRRIQ3	A6PVS8	624 aa	Predicted RBP	6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621		M0QZQ0	153 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	SYN3	O14994	580 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	CLASP2	O75122	1294 aa	Known RBP	6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	GNA14	O95837	355 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	TNNC2	P02585	160 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	C4BPA	P04003	597 aa	Known RBP	6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	AMY2A	P04746	511 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	ITGB3	P05106	788 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	UROD	P06132	367 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	KRT19	P08727	400 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	CNP	P09543	421 aa	Known RBP	6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	TMEM191B	P0C7N4	346 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	TRIM49	P0CI25	452 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	TRIM49C	P0CI26	452 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	PTPN1	P18031	435 aa	Known RBP	6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	KRT15	P19012	456 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	AMY2B	P19961	511 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	PAX3	P23760	479 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	TKT	P29401	623 aa	Known RBP	6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	CA8	P35219	290 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	NRIP1	P48552	1158 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	TAF6	P49848	677 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	KLK7	P49862	253 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	VAMP7	P51809	220 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	AP3M2	P53677	418 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	KRTAP10-2	P60368	255 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	RBP5	P82980	135 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	UBXN1	Q04323	297 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	PLP2	Q04941	152 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	GOLGA8F	Q08AF8	430 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	GOLGA8DP	Q0D2H9	430 aa		6.98	□□□□□ -1.29
HIPK1-210	ENST00000514621	HYAL1	Q12794	435 aa		6.98	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms