RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 PTPRN2Q92932 1015 aa11.62□□□□□ -0.55
RNF4-218ENST00000513284 ATXN7L3BQ96GX2 97 aa11.62□□□□□ -0.55
RNF4-218ENST00000513284 UBXN6Q9BZV1 441 aa11.62□□□□□ -0.55
RNF4-218ENST00000513284 KBTBD4Q9NVX7 518 aa11.62□□□□□ -0.55
RNF4-218ENST00000513284 CYTH4Q9UIA0 394 aa11.62□□□□□ -0.55
RNF4-218ENST00000513284 STRIP2Q9ULQ0 834 aa11.62□□□□□ -0.55
RNF4-218ENST00000513284 ENTPD2Q9Y5L3 495 aa11.62□□□□□ -0.55
RNF4-218ENST00000513284 HEMK1Q9Y5R4 338 aaPredicted RBP11.62□□□□□ -0.55
RNF4-218ENST00000513284 TDRD6O60522 2096 aaKnown RBP11.62□□□□□ -0.55
RNF4-218ENST00000513284 TLN1Q9Y490 2541 aaKnown RBP11.61□□□□□ -0.55
RNF4-218ENST00000513284 CLEC18AA5D8T8 446 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 TULP2O00295 520 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 FFAR2O15552 330 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 TBL1XO60907 577 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 RNASEH1O60930 286 aaKnown RBP11.61□□□□□ -0.55
RNF4-218ENST00000513284 RTN2O75298 545 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 C5AR1P21730 350 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 PSMD8P48556 350 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 HARS2P49590 506 aaKnown RBP11.61□□□□□ -0.55
RNF4-218ENST00000513284 AP3M2P53677 418 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 SNRPFP62306 86 aaKnown RBP11.61□□□□□ -0.55
RNF4-218ENST00000513284 ASIC1P78348 528 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 CEBPZQ03701 1054 aaKnown RBP11.61□□□□□ -0.55
RNF4-218ENST00000513284 SFSWAPQ12872 951 aaKnown RBP11.61□□□□□ -0.55
RNF4-218ENST00000513284 OVGP1Q12889 678 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 FAM133BQ5BKY9 247 aaKnown RBP11.61□□□□□ -0.55
RNF4-218ENST00000513284 MPP7Q5T2T1 576 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 CLEC18BQ6UXF7 455 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 SV2AQ7L0J3 742 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 RSRC2Q7L4I2 434 aaKnown RBP11.61□□□□□ -0.55
RNF4-218ENST00000513284 PRPF39Q86UA1 669 aaKnown RBP11.61□□□□□ -0.55
RNF4-218ENST00000513284 PIGZQ86VD9 579 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 CLEC18CQ8NCF0 446 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 FIBINQ8TAL6 211 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 EXTL1Q92935 676 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 INTS4Q96HW7 963 aaKnown RBP11.61□□□□□ -0.55
RNF4-218ENST00000513284 NT5C1AQ9BXI3 368 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 TNMDQ9H2S6 317 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 CUEDC2Q9H467 287 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 KLHL11Q9NVR0 708 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 DMAC2Q9NW81 257 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 TJP2Q9UDY2 1190 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 ERVW-1Q9UQF0 538 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 PCDHGA8Q9Y5G5 932 aa11.61□□□□□ -0.55
RNF4-218ENST00000513284 EXOC3O60645 756 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 PIAS2O75928 621 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 RPN1P04843 607 aaKnown RBP11.6□□□□□ -0.55
RNF4-218ENST00000513284 GP1BAP07359 652 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 SLFN14P0C7P3 912 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 P4HA1P13674 534 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 VAV1P15498 845 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 RBMS1P29558 406 aaKnown RBP11.6□□□□□ -0.55
RNF4-218ENST00000513284 KCNMA1Q12791 1236 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 STAT4Q14765 748 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 SLC39A14Q15043 492 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 STK38Q15208 465 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 E2F4Q16254 413 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 ZSCAN23Q3MJ62 389 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 POM121L1PQ3SYA9 428 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 NADSYN1Q6IA69 706 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 FAM173BQ6P4H8 233 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 CLEC14AQ86T13 490 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 PDILTQ8N807 584 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 KDM1BQ8NB78 822 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 TAF4BQ92750 862 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 KLHDC7BQ96G42 594 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 CCNL2Q96S94 520 aaPredicted RBP11.6□□□□□ -0.55
RNF4-218ENST00000513284 SEMA3CQ99985 751 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 STIM2Q9P246 746 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 SARDHQ9UL12 918 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 HBS1LQ9Y450 684 aaKnown RBP11.6□□□□□ -0.55
RNF4-218ENST00000513284 USP9YO00507 2555 aaPredicted RBP11.6□□□□□ -0.55
RNF4-218ENST00000513284 ITIH6Q6UXX5 1313 aa11.6□□□□□ -0.55
RNF4-218ENST00000513284 LRRK2Q5S007 2527 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 K7ESM1 405 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 MSI1O43347 362 aaKnown RBP11.59□□□□□ -0.55
RNF4-218ENST00000513284 NEBLO76041 1014 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 LATS1O95835 1130 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 ZBED1O96006 694 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 HLA-DRAP01903 254 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 FAM87AP0C7U9 286 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 PDIA4P13667 645 aaKnown RBP11.59□□□□□ -0.55
RNF4-218ENST00000513284 CR2P20023 1033 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 SYT1P21579 422 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 MZF1P28698 734 aaPredicted RBP11.59□□□□□ -0.55
RNF4-218ENST00000513284 CASP1P29466 404 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 TKTL1P51854 596 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 ZNF445P59923 1031 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 ST8SIA6P61647 398 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 RPS24P62847 133 aaKnown RBP11.59□□□□□ -0.55
RNF4-218ENST00000513284 TGIF1Q15583 401 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 ZNF394Q53GI3 561 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 FAM26FQ5R3K3 315 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 BSPRYQ5W0U4 402 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 CNNM4Q6P4Q7 775 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 XKR5Q6UX68 686 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 APCDD1Q8J025 514 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 ARHGAP18Q8N392 663 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 TMEM145Q8NBT3 493 aa11.59□□□□□ -0.55
RNF4-218ENST00000513284 IFI44Q8TCB0 444 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms