RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ASCL3Q9NQ33 180 aa19.73■□□□□ 0.75
HMGCS1-206ENST00000511774 CISHQ9NSE2 258 aa19.73■□□□□ 0.75
HMGCS1-206ENST00000511774 UCKL1Q9NWZ5 548 aa19.73■□□□□ 0.75
HMGCS1-206ENST00000511774 ERVW-1Q9UQF0 538 aa19.73■□□□□ 0.75
HMGCS1-206ENST00000511774 DOPEY2Q9Y3R5 2298 aa19.72■□□□□ 0.75
HMGCS1-206ENST00000511774 A0A1W2PNU3 283 aaPredicted RBP19.72■□□□□ 0.75
HMGCS1-206ENST00000511774 PDXKO00764 312 aa19.72■□□□□ 0.75
HMGCS1-206ENST00000511774 RNASEH1O60930 286 aaKnown RBP19.72■□□□□ 0.75
HMGCS1-206ENST00000511774 GIMD1P0DJR0 217 aa19.72■□□□□ 0.75
HMGCS1-206ENST00000511774 MAT2AP31153 395 aaKnown RBP19.72■□□□□ 0.75
HMGCS1-206ENST00000511774 NUMBP49757 651 aa19.72■□□□□ 0.75
HMGCS1-206ENST00000511774 GABREP78334 506 aa19.72■□□□□ 0.75
HMGCS1-206ENST00000511774 KCNC4Q03721 635 aa19.72■□□□□ 0.75
HMGCS1-206ENST00000511774 GOLGA7BQ2TAP0 167 aa19.72■□□□□ 0.75
HMGCS1-206ENST00000511774 SND1Q7KZF4 910 aaKnown RBP eCLIP19.72■□□□□ 0.752e-6■■■□□ 17
HMGCS1-206ENST00000511774 PTPRN2Q92932 1015 aa19.72■□□□□ 0.75
HMGCS1-206ENST00000511774 IMPG2Q9BZV3 1241 aa19.72■□□□□ 0.75
HMGCS1-206ENST00000511774 MAGEF1Q9HAY2 307 aa19.72■□□□□ 0.75
HMGCS1-206ENST00000511774 SSUH2Q9Y2M2 353 aa19.72■□□□□ 0.75
HMGCS1-206ENST00000511774 ITIH6Q6UXX5 1313 aa19.72■□□□□ 0.75
HMGCS1-206ENST00000511774 ACSL4O60488 711 aa19.71■□□□□ 0.75
HMGCS1-206ENST00000511774 CUTAO60888 179 aa19.71■□□□□ 0.75
HMGCS1-206ENST00000511774 DXOO77932 396 aaKnown RBP19.71■□□□□ 0.75
HMGCS1-206ENST00000511774 WISP1O95388 367 aa19.71■□□□□ 0.75
HMGCS1-206ENST00000511774 ST8SIA6P61647 398 aa19.71■□□□□ 0.75
HMGCS1-206ENST00000511774 ZNF211Q13398 564 aaPredicted RBP19.71■□□□□ 0.75
HMGCS1-206ENST00000511774 PITRM1Q5JRX3 1037 aa19.71■□□□□ 0.75
HMGCS1-206ENST00000511774 KIAA1614Q5VZ46 1190 aa19.71■□□□□ 0.75
HMGCS1-206ENST00000511774 MSANTD2Q6P1R3 559 aa19.71■□□□□ 0.75
HMGCS1-206ENST00000511774 OXR1Q8N573 874 aa19.71■□□□□ 0.75
HMGCS1-206ENST00000511774 RNF139Q8WU17 664 aa19.71■□□□□ 0.75
HMGCS1-206ENST00000511774 SNRNP27Q8WVK2 155 aaKnown RBP19.71■□□□□ 0.75
HMGCS1-206ENST00000511774 CYTH4Q9UIA0 394 aa19.71■□□□□ 0.75
HMGCS1-206ENST00000511774 TBC1D3DA0A087WVF3 549 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 TBC1D3IA0A087WXS9 549 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 TBC1D3EA0A087X179 549 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 TBC1D3KA0A087X1G2 549 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 LY6G6EA0A0G2JKS1 128 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 A0A1B0GVM2 712 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 TARSL2A2RTX5 802 aaKnown RBP19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 TBC1D3FA6NER0 549 aaPredicted RBP19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 TBC1D3LB9A6J9 549 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 XPO1O14980 1071 aaKnown RBP19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 KLK10O43240 276 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 OPA1O60313 960 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 RTN2O75298 545 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 ASLP04424 464 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 TBC1D3HP0C7X1 549 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 PDIA4P13667 645 aaKnown RBP19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 MZF1P28698 734 aaPredicted RBP19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 STK19P49842 368 aaPredicted RBP19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 E2F1Q01094 437 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 KMT5BQ4FZB7 885 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 BROXQ5VW32 411 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 TBC1D3GQ6DHY5 549 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 TBC1D3CQ6IPX1 549 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 TBC1D3Q8IZP1 549 aaPredicted RBP19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 APCDD1Q8J025 514 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 KCNE4Q8WWG9 221 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 FAM131CQ96AQ9 280 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 RPL10LQ96L21 214 aaKnown RBP19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 TSPAN16Q9UKR8 245 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 U3KQA8 63 aa19.7■□□□□ 0.74
HMGCS1-206ENST00000511774 RP1P56715 2156 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 EDDM13A0A1B0GTR0 161 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 SLC28A2O43868 658 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 USP12O75317 370 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 C5AR1P21730 350 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 DGKAP23743 735 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 UCNP55089 124 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 DAOAP59103 153 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 VAC14Q08AM6 782 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 SLC45A4Q5BKX6 768 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 TMC6Q7Z403 805 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 CFAP52Q8N1V2 620 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 CARNMT1Q8N4J0 409 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 KDM1BQ8NB78 822 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 UBA3Q8TBC4 463 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 VCPIP1Q96JH7 1222 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 NUCKS1Q9H1E3 243 aaKnown RBP19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 LRRC4Q9HBW1 653 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 SERTAD1Q9UHV2 236 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 SARDHQ9UL12 918 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 FRMD4BQ9Y2L6 1034 aa19.69■□□□□ 0.74
HMGCS1-206ENST00000511774 PMS2P1A4D2B8 440 aa19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 PIK3R2O00459 728 aa19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 MAPK13O15264 365 aa19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 FFAR2O15552 330 aa19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 CSO75390 466 aaKnown RBP19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 ADH1BP00325 375 aa19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 LSSP48449 732 aa19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 SFSWAPQ12872 951 aaKnown RBP19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 POM121L1PQ3SYA9 428 aa19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 IQCHQ86VS3 1027 aa19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 LURAP1LQ8IV03 231 aa19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 HJURPQ8NCD3 748 aaPredicted RBP19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 OR4C6Q8NH72 309 aa19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 CLEC4CQ8WTT0 213 aa19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 MED8Q96G25 268 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms