RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 LRRC55Q6ZSA7 311 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 USP45Q70EL2 814 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 BEND5Q7L4P6 421 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 CCDC186Q7Z3E2 898 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 PIM3Q86V86 326 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SLC9A9Q8IVB4 645 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 LGI2Q8N0V4 545 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 ESX1Q8N693 406 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 GDAP1Q8TB36 358 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 GPT2Q8TD30 523 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 MCOLN3Q8TDD5 553 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 STK32AQ8WU08 396 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 KCNN1Q92952 543 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 CNTNAP3BQ96NU0 1288 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 FCRL3Q96P31 734 aaPredicted RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SLC38A3Q99624 504 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 C7orf25Q9BPX7 421 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 CNTNAP3Q9BZ76 1288 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 MTMR12Q9C0I1 747 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 WDCPQ9H6R7 721 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 ATP13A3Q9H7F0 1226 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 EPB41L5Q9HCM4 733 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 PDE11AQ9HCR9 933 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 ITM2CQ9NQX7 267 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 TMPRSS4Q9NRS4 437 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 RNF19AQ9NV58 838 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 CACNA2D2Q9NY47 1150 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 PKD2L2Q9NZM6 624 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 EIF2B4Q9UI10 523 aaKnown RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 ZMIZ1Q9ULJ6 1067 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 NFU1Q9UMS0 254 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 POLHQ9Y253 713 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 HEBP2Q9Y5Z4 205 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 COMMD10Q9Y6G5 202 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 A0A0G2JMZ2 1700 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 MYH6P13533 1939 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 CXorf51AA0A1B0GTR3 108 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 MATN2O00339 956 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 DDX3XO00571 662 aaKnown RBP eCLIP2.92□□□□□ -1.94
CLOCK-209ENST00000511124 FANCGO15287 622 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 FGF10O15520 208 aaPredicted RBP2.92□□□□□ -1.94
CLOCK-209ENST00000511124 KLK10O43240 276 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 MBD3O95983 291 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 EGFP01133 1207 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 CYP17A1P05093 508 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 CYP2F1P24903 491 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 FLT3P36888 993 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 WASP42768 502 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 PEX5P50542 639 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 ACY1Q03154 408 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 CST6Q15828 149 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 ZNF77Q15935 545 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 PHF19Q5T6S3 580 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 FHL5Q5TD97 284 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 RWDD4Q6NW29 188 aaKnown RBP2.92□□□□□ -1.94
CLOCK-209ENST00000511124 SETD3Q86TU7 594 aaPredicted RBP2.92□□□□□ -1.94
CLOCK-209ENST00000511124 HORMAD1Q86X24 394 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 PLXDC1Q8IUK5 500 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 DENND1CQ8IV53 801 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 CRYBG2Q8N1P7 616 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 DCLK2Q8N568 766 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 NAT16Q8N8M0 369 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 MLKLQ8NB16 471 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 ASB12Q8WXK4 309 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 UBXN4Q92575 508 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 SAAL1Q96ER3 474 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 MED8Q96G25 268 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 TIGD1Q96MW7 591 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 CCNL2Q96S94 520 aaPredicted RBP2.92□□□□□ -1.94
CLOCK-209ENST00000511124 CINPQ9BW66 212 aaPredicted RBP2.92□□□□□ -1.94
CLOCK-209ENST00000511124 SLC46A2Q9BY10 475 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 MINDY3Q9H8M7 445 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 HHATLQ9HCP6 504 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 ATP13A1Q9HD20 1204 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 RAB20Q9NX57 234 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 GTSE1Q9NYZ3 720 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 KLQ9UEF7 1012 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 FAM169AQ9Y6X4 670 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 TLR4O00206 839 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 PTGESO14684 152 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 DYRK3O43781 588 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 PRPSAP2O60256 369 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 GCATO75600 419 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 F11P03951 625 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 GJA1P17302 382 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 CMA1P23946 247 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 DNAJB1P25685 340 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 NMT1P30419 496 aaKnown RBP2.92□□□□□ -1.94
CLOCK-209ENST00000511124 CASRP41180 1078 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 MAPKAPK2P49137 400 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 LMAN1P49257 510 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 SMSP52788 366 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 SLC5A3P53794 718 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 PLOD1Q02809 727 aaPredicted RBP2.92□□□□□ -1.94
CLOCK-209ENST00000511124 ITKQ08881 620 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 ZNF211Q13398 564 aaPredicted RBP2.92□□□□□ -1.94
CLOCK-209ENST00000511124 KRT81Q14533 505 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 EML3Q32P44 896 aa2.92□□□□□ -1.94
CLOCK-209ENST00000511124 TMEM119Q4V9L6 283 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms