RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 NR2E3Q9Y5X4 410 aa13.37□□□□□ -0.27
CAST-223ENST00000508608 PDE5AO76074 875 aa13.36□□□□□ -0.27
CAST-223ENST00000508608 COX4I1P13073 169 aa13.36□□□□□ -0.27
CAST-223ENST00000508608 UQCRBP14927 111 aa13.36□□□□□ -0.27
CAST-223ENST00000508608 SERPINB6P35237 376 aa13.36□□□□□ -0.27
CAST-223ENST00000508608 IREB2P48200 963 aaKnown RBP13.36□□□□□ -0.27
CAST-223ENST00000508608 TBL3Q12788 808 aaKnown RBP13.36□□□□□ -0.27
CAST-223ENST00000508608 FBXO47Q5MNV8 452 aa13.36□□□□□ -0.27
CAST-223ENST00000508608 EPGNQ6UW88 154 aa13.36□□□□□ -0.27
CAST-223ENST00000508608 ARMCX2Q7L311 632 aa13.36□□□□□ -0.27
CAST-223ENST00000508608 DEFB106AQ8N104 65 aa13.36□□□□□ -0.27
CAST-223ENST00000508608 NME8Q8N427 588 aa13.36□□□□□ -0.27
CAST-223ENST00000508608 CCDC124Q96CT7 223 aaKnown RBP13.36□□□□□ -0.27
CAST-223ENST00000508608 ZNF560Q96MR9 790 aa13.36□□□□□ -0.27
CAST-223ENST00000508608 ZMAT2Q96NC0 199 aaKnown RBP13.36□□□□□ -0.27
CAST-223ENST00000508608 EBF3Q9H4W6 596 aa13.36□□□□□ -0.27
CAST-223ENST00000508608 PIH1D1Q9NWS0 290 aaKnown RBP13.36□□□□□ -0.27
CAST-223ENST00000508608 SNTG2Q9NY99 539 aa13.36□□□□□ -0.27
CAST-223ENST00000508608 STAP1Q9ULZ2 295 aa13.36□□□□□ -0.27
CAST-223ENST00000508608 UBQLN1Q9UMX0 589 aaKnown RBP13.36□□□□□ -0.27
CAST-223ENST00000508608 RAD54BQ9Y620 910 aa13.36□□□□□ -0.27
CAST-223ENST00000508608 XPO1O14980 1071 aaKnown RBP13.35□□□□□ -0.27
CAST-223ENST00000508608 DCXO43602 365 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 TIMM44O43615 452 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 PEX1O43933 1283 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 APOA4P06727 396 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 ZNF286BP0CG31 522 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 GNL1P36915 607 aaPredicted RBP13.35□□□□□ -0.27
CAST-223ENST00000508608 MLH1P40692 756 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 HK2P52789 917 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 VWA5B1Q5TIE3 1220 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 STRA8Q7Z7C7 330 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 ERO1BQ86YB8 467 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 GDPD5Q8WTR4 605 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 FAM149B1Q96BN6 582 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 ZNF669Q96BR6 464 aaPredicted RBP13.35□□□□□ -0.27
CAST-223ENST00000508608 PRDM12Q9H4Q4 367 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 COG4Q9H9E3 785 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 ELP3Q9H9T3 547 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 BFARQ9NZS9 450 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 KLHL8Q9P2G9 620 aaPredicted RBP13.35□□□□□ -0.27
CAST-223ENST00000508608 ERI2A8K979 691 aaKnown RBP13.35□□□□□ -0.27
CAST-223ENST00000508608 EEF2KO00418 725 aaKnown RBP13.35□□□□□ -0.27
CAST-223ENST00000508608 CASQ2O14958 399 aaPredicted RBP13.35□□□□□ -0.27
CAST-223ENST00000508608 CD4P01730 458 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 PIM1P11309 404 aaPredicted RBP13.35□□□□□ -0.27
CAST-223ENST00000508608 ARRB2P32121 409 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 NOS2P35228 1153 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 PNPLA4P41247 253 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 MTTPP55157 894 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 SH3BGRP55822 239 aaPredicted RBP13.35□□□□□ -0.27
CAST-223ENST00000508608 Q3C1V9 767 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 FRMD7Q6ZUT3 714 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 PID1Q7Z2X4 250 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 CMC1Q7Z7K0 106 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 SLC2A14Q8TDB8 520 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 EMID1Q96A84 441 aaPredicted RBP13.35□□□□□ -0.27
CAST-223ENST00000508608 TNIP3Q96KP6 325 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 BTBD9Q96Q07 612 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 SERPINI1Q99574 410 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 DDX50Q9BQ39 737 aaKnown RBP13.35□□□□□ -0.27
CAST-223ENST00000508608 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 CEP41Q9BYV8 373 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 VANGL2Q9ULK5 521 aa13.35□□□□□ -0.27
CAST-223ENST00000508608 TSC2P49815 1807 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 TRIM13O60858 407 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 RNASEH1O60930 286 aaKnown RBP13.34□□□□□ -0.27
CAST-223ENST00000508608 AP2A1O95782 977 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 PDGFRBP09619 1106 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 RAG1P15918 1043 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 HADHAP40939 763 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 BAG6P46379 1132 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 CSE1LP55060 971 aaKnown RBP13.34□□□□□ -0.27
CAST-223ENST00000508608 KLF10Q13118 480 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 DYNC1I2Q13409 638 aaKnown RBP13.34□□□□□ -0.27
CAST-223ENST00000508608 DCAF6Q58WW2 860 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 GPC2Q8N158 579 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 RDH11Q8TC12 318 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 KBTBD7Q8WVZ9 684 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 C18orf25Q96B23 403 aaPredicted RBP13.34□□□□□ -0.27
CAST-223ENST00000508608 VTA1Q9NP79 307 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 ADAMTS6Q9UKP5 1117 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 PRPF19Q9UMS4 504 aaKnown RBP13.34□□□□□ -0.27
CAST-223ENST00000508608 SBF1O95248 1867 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 A0A096LPK6 155 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 SLC22A2O15244 555 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 NCAM2O15394 837 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 XPOTO43592 962 aaKnown RBP13.34□□□□□ -0.27
CAST-223ENST00000508608 CREB3O43889 395 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 AIF1P55008 147 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 ADIGQ0VDE8 80 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 DPYSQ14117 519 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 TRIP10Q15642 601 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 GRIK4Q16099 956 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 LIN52Q52LA3 116 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 RASIP1Q5U651 963 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 FSTL4Q6MZW2 842 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 NOTUMQ6P988 496 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 CES3Q6UWW8 571 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 C16orf89Q6UX73 402 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms