RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 VGLL4Q14135 290 aa13□□□□□ -0.33
DDR1-262ENST00000508312 NR1D2Q14995 579 aa13□□□□□ -0.33
DDR1-262ENST00000508312 CYP2A13Q16696 494 aa13□□□□□ -0.33
DDR1-262ENST00000508312 METTL21CQ5VZV1 264 aa13□□□□□ -0.33
DDR1-262ENST00000508312 DENND1BQ6P3S1 775 aa13□□□□□ -0.33
DDR1-262ENST00000508312 CATSPERGQ6ZRH7 1159 aa13□□□□□ -0.33
DDR1-262ENST00000508312 SH2D5Q6ZV89 423 aa13□□□□□ -0.33
DDR1-262ENST00000508312 ZNF778Q96MU6 729 aa13□□□□□ -0.33
DDR1-262ENST00000508312 CXCL16Q9H2A7 254 aa13□□□□□ -0.33
DDR1-262ENST00000508312 ELP3Q9H9T3 547 aa13□□□□□ -0.33
DDR1-262ENST00000508312 IGSF9Q9P2J2 1179 aa13□□□□□ -0.33
DDR1-262ENST00000508312 IP6K2Q9UHH9 426 aa13□□□□□ -0.33
DDR1-262ENST00000508312 ZNHIT2Q9UHR6 403 aa13□□□□□ -0.33
DDR1-262ENST00000508312 COL2A1P02458 1487 aaPredicted RBP13□□□□□ -0.33
DDR1-262ENST00000508312 CNTNAP2Q9UHC6 1331 aa13□□□□□ -0.33
DDR1-262ENST00000508312 A0A0B4J269 797 aa13□□□□□ -0.33
DDR1-262ENST00000508312 A0A1W2PPW3 197 aa13□□□□□ -0.33
DDR1-262ENST00000508312 NEMP1O14524 444 aa13□□□□□ -0.33
DDR1-262ENST00000508312 KRT38O76015 456 aa13□□□□□ -0.33
DDR1-262ENST00000508312 ALDH2P05091 517 aa13□□□□□ -0.33
DDR1-262ENST00000508312 MCF2P10911 925 aa13□□□□□ -0.33
DDR1-262ENST00000508312 GARTP22102 1010 aa13□□□□□ -0.33
DDR1-262ENST00000508312 IL1R2P27930 398 aa13□□□□□ -0.33
DDR1-262ENST00000508312 TRPC3Q13507 836 aa13□□□□□ -0.33
DDR1-262ENST00000508312 KIAA0319LQ8IZA0 1049 aa13□□□□□ -0.33
DDR1-262ENST00000508312 ZNF786Q8N393 782 aa13□□□□□ -0.33
DDR1-262ENST00000508312 LZTR1Q8N653 840 aa13□□□□□ -0.33
DDR1-262ENST00000508312 UBA3Q8TBC4 463 aa13□□□□□ -0.33
DDR1-262ENST00000508312 KCNN1Q92952 543 aa13□□□□□ -0.33
DDR1-262ENST00000508312 FAF2Q96CS3 445 aa13□□□□□ -0.33
DDR1-262ENST00000508312 LPIN3Q9BQK8 851 aa13□□□□□ -0.33
DDR1-262ENST00000508312 FERMT1Q9BQL6 677 aa13□□□□□ -0.33
DDR1-262ENST00000508312 KLC2Q9H0B6 622 aa13□□□□□ -0.33
DDR1-262ENST00000508312 PARVAQ9NVD7 372 aa13□□□□□ -0.33
DDR1-262ENST00000508312 TUBA8Q9NY65 449 aaPredicted RBP13□□□□□ -0.33
DDR1-262ENST00000508312 CYTH4Q9UIA0 394 aa13□□□□□ -0.33
DDR1-262ENST00000508312 RNF11Q9Y3C5 154 aa13□□□□□ -0.33
DDR1-262ENST00000508312 FER1L6Q2WGJ9 1857 aa13□□□□□ -0.33
DDR1-262ENST00000508312 SOWAHBA6NEL2 793 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 IQCF3P0C7M6 154 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 EIF3EP60228 445 aaKnown RBP12.99□□□□□ -0.33
DDR1-262ENST00000508312 GPR107Q5VW38 600 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 SCYL2Q6P3W7 929 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 DRICH1Q6PGQ1 229 aaPredicted RBP12.99□□□□□ -0.33
DDR1-262ENST00000508312 NKD2Q969F2 451 aaPredicted RBP12.99□□□□□ -0.33
DDR1-262ENST00000508312 KLRG1Q96E93 195 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 CPB2Q96IY4 423 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 PIWIL1Q96J94 861 aaKnown RBP12.99□□□□□ -0.33
DDR1-262ENST00000508312 DHRS1Q96LJ7 313 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 TWNKQ96RR1 684 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 GPATCH2LQ9NWQ4 482 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 RIMS3Q9UJD0 308 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 STX16-NPEPL1H3BU86 382 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 ZC3H11AO75152 810 aaKnown RBP eCLIP12.99□□□□□ -0.33
DDR1-262ENST00000508312 SNNO75324 88 aaPredicted RBP12.99□□□□□ -0.33
DDR1-262ENST00000508312 FARP2O94887 1054 aaPredicted RBP12.99□□□□□ -0.33
DDR1-262ENST00000508312 CD1EP15812 388 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 TUBB3Q13509 450 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 SPIDRQ14159 915 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 TRIM16LQ309B1 348 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 PPM1LQ5SGD2 360 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 NANOGP8Q6NSW7 305 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 BNC2Q6ZN30 1099 aaPredicted RBP12.99□□□□□ -0.33
DDR1-262ENST00000508312 SAPCD2Q86UD0 394 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 SNX32Q86XE0 403 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 RFX6Q8HWS3 928 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 WDTC1Q8N5D0 677 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 PGBD4Q96DM1 585 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 LENG8Q96PV6 779 aaPredicted RBP12.99□□□□□ -0.33
DDR1-262ENST00000508312 TXNRD2Q9NNW7 524 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 GID8Q9NWU2 228 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 STK39Q9UEW8 545 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 RGPD3A6NKT7 1758 aaPredicted RBP12.99□□□□□ -0.33
DDR1-262ENST00000508312 RGPD4Q7Z3J3 1758 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 NFASCO94856 1347 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 RFPL1O75677 317 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 ZNF12P17014 697 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 TGFB2P61812 414 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 ZNF829Q3KNS6 432 aaPredicted RBP12.99□□□□□ -0.33
DDR1-262ENST00000508312 FAM47BQ8NA70 645 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 ADAM32Q8TC27 787 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 PPWD1Q96BP3 646 aaKnown RBP12.99□□□□□ -0.33
DDR1-262ENST00000508312 RANBP9Q96S59 729 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 MAGEB5Q9BZ81 275 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 DHX33Q9H6R0 707 aaKnown RBP12.99□□□□□ -0.33
DDR1-262ENST00000508312 COQ10BQ9H8M1 238 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 CROTQ9UKG9 612 aa12.99□□□□□ -0.33
DDR1-262ENST00000508312 CROCCQ5TZA2 2017 aa12.98□□□□□ -0.33
DDR1-262ENST00000508312 CNOT3O75175 753 aaKnown RBP12.98□□□□□ -0.33
DDR1-262ENST00000508312 DDNO94850 711 aaPredicted RBP12.98□□□□□ -0.33
DDR1-262ENST00000508312 ATE1O95260 518 aa12.98□□□□□ -0.33
DDR1-262ENST00000508312 F7P08709 466 aaPredicted RBP12.98□□□□□ -0.33
DDR1-262ENST00000508312 ETFBP38117 255 aa12.98□□□□□ -0.33
DDR1-262ENST00000508312 ZNF280AP59817 542 aaPredicted RBP12.98□□□□□ -0.33
DDR1-262ENST00000508312 GNA12Q03113 381 aa12.98□□□□□ -0.33
DDR1-262ENST00000508312 RGS21Q2M5E4 152 aa12.98□□□□□ -0.33
DDR1-262ENST00000508312 Q3C1V9 767 aa12.98□□□□□ -0.33
DDR1-262ENST00000508312 FSCBQ5H9T9 825 aa12.98□□□□□ -0.33
DDR1-262ENST00000508312 TMA16Q96EY4 203 aaKnown RBP12.98□□□□□ -0.33
DDR1-262ENST00000508312 RNPEPQ9H4A4 650 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms