RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 RBM12BQ8IXT5 1001 aaKnown RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 LRRC43Q8N309 656 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 AFAP1L2Q8N4X5 818 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 TAB3Q8N5C8 712 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 SLC25A41Q8N5S1 370 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 ARFGAP1Q8N6T3 406 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 TERB1Q8NA31 727 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 KLHL23Q8NBE8 558 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 KYQ8NBH2 561 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 AGBL3Q8NEM8 1001 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 DNERQ8NFT8 737 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 TOP1MTQ969P6 601 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 TMEM143Q96AN5 459 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 ELMO3Q96BJ8 720 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 DCUN1D1Q96GG9 259 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 TMEM176AQ96HP8 235 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZBTB45Q96K62 511 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 CLPTM1LQ96KA5 538 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 CNDP1Q96KN2 507 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 SIGLEC10Q96LC7 697 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 BIRC8Q96P09 236 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 QKIQ96PU8 341 aaKnown RBP eCLIP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 CPXM1Q96SM3 734 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 MPHOSPH6Q99547 160 aaKnown RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 CPNE1Q99829 537 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 DDX50Q9BQ39 737 aaKnown RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 TRIM56Q9BRZ2 755 aaKnown RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 EFHD1Q9BUP0 239 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 MECRQ9BV79 373 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 CDH19Q9H159 772 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 ACAD9Q9H845 621 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 VRTNQ9H8Y1 702 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 RPF1Q9H9Y2 349 aaKnown RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 XPNPEP3Q9NQH7 507 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 TBCCD1Q9NVR7 557 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 NSMCE4AQ9NXX6 385 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 MOCS1Q9NZB8 636 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 RCOR3Q9P2K3 495 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 COPG2Q9UBF2 871 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 CPSF3Q9UKF6 684 aaKnown RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 ANKRD6Q9Y2G4 727 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 INPP5FQ9Y2H2 1132 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 ANKRD31Q8N7Z5 1873 aa5.09□□□□□ -1.6
HMGB3P16-201ENST00000508037 ARID2Q68CP9 1835 aa5.09□□□□□ -1.6
HMGB3P16-201ENST00000508037 A0A0A0MRY4 1105 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 A0A1W2PRU2 124 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 CLRN2A0PK11 232 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 MAGEB16A2A368 324 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 C2CD4BA6NLJ0 364 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 CXorf49A8MYA2 514 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 GPR25O00155 361 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 PIK3R2O00459 728 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 CYB561D2O14569 222 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 TPP1O14773 563 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 TIMM44O43615 452 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 TRIM13O60858 407 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 CLASP2O75122 1294 aaKnown RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 CILPO75339 1184 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 TADA2AO75478 443 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 STAU1O95793 577 aaKnown RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 CST3P01034 146 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 PRKCBP05771 671 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 POLBP06746 335 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 MMP10P09238 476 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 CD48P09326 243 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 SRGAP2CP0DJJ0 459 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 SRGAP2BP0DMP2 458 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 VSIG8P0DPA2 414 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 ME2P23368 584 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 RBL1P28749 1068 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 TYK2P29597 1187 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 GPC1P35052 558 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 ARL4AP40617 200 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 PTPN9P43378 593 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 POLD2P49005 469 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 NUMBP49757 651 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 RNF144AP50876 292 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 KPNA2P52292 529 aaKnown RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 NUP107P57740 925 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 ESRRGP62508 458 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 RPL10AP62906 217 aaKnown RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 HPCAP84074 193 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 CREB5Q02930 508 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 SULT2A1Q06520 285 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 NIPAL4Q0D2K0 466 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 DLG1Q12959 904 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 USP4Q13107 963 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 KLF10Q13118 480 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 PRKAA1Q13131 559 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 MSLNQ13421 630 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 ART3Q13508 389 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 CAPSQ13938 189 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 RFTN1Q14699 578 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 PCLAFQ15004 111 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 MAPRE2Q15555 327 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 TBC1D25Q3MII6 688 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 HSF5Q4G112 596 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 LCE2CQ5TA81 110 aa5.08□□□□□ -1.6
HMGB3P16-201ENST00000508037 LPCAT4Q643R3 524 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms