RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 PTPN7P35236 360 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 CDR1P51861 262 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 SLC25A11Q02978 314 aaKnown RBP8.71□□□□□ -1.02
PDGFC-205ENST00000506880 ZNF252P-AS1Q0IIN9 211 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 CCDC15Q0P6D6 951 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 BYSLQ13895 437 aaKnown RBP8.71□□□□□ -1.02
PDGFC-205ENST00000506880 RFTN1Q14699 578 aaPredicted RBP8.71□□□□□ -1.02
PDGFC-205ENST00000506880 GRM3Q14832 879 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 C15orf59Q2T9L4 293 aaPredicted RBP8.71□□□□□ -1.02
PDGFC-205ENST00000506880 ODF2Q5BJF6 829 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 RALGPS1Q5JS13 557 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 NADSYN1Q6IA69 706 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 SDE2Q6IQ49 451 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 RETSATQ6NUM9 610 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 SYT13Q7L8C5 426 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 ZSCAN30Q86W11 494 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 FAM131BQ86XD5 332 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 LGI2Q8N0V4 545 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 CCAR2Q8N163 923 aaKnown RBP8.71□□□□□ -1.02
PDGFC-205ENST00000506880 RTL3Q8N8U3 475 aaKnown RBP8.71□□□□□ -1.02
PDGFC-205ENST00000506880 TPCN2Q8NHX9 752 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 KIAA1524Q8TCG1 905 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 PBXIP1Q96AQ6 731 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 ISG20Q96AZ6 181 aaKnown RBP8.71□□□□□ -1.02
PDGFC-205ENST00000506880 FAF2Q96CS3 445 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 RBM41Q96IZ5 413 aaKnown RBP8.71□□□□□ -1.02
PDGFC-205ENST00000506880 CCDC114Q96M63 670 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 CEP44Q9C0F1 390 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 SEMA4AQ9H3S1 761 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 DNAJC17Q9NVM6 304 aaKnown RBP8.71□□□□□ -1.02
PDGFC-205ENST00000506880 SUN2Q9UH99 717 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 HPCAL4Q9UM19 191 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 SCML1Q9UN30 329 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 PLA2G4CQ9UP65 541 aa8.71□□□□□ -1.02
PDGFC-205ENST00000506880 TARSL2A2RTX5 802 aaKnown RBP8.7□□□□□ -1.02
PDGFC-205ENST00000506880 TBC1D3BA6NDS4 549 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 FAM170BA6NMN3 283 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 H0Y626 953 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 ALOX15BO15296 676 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 TBL1XO60907 577 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 LRIG2O94898 1065 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 MOCS2O96007 188 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-205ENST00000506880 PTMAP06454 111 aaKnown RBP8.7□□□□□ -1.02
PDGFC-205ENST00000506880 HMBSP08397 361 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 POLR2EP19388 210 aaKnown RBP8.7□□□□□ -1.02
PDGFC-205ENST00000506880 MX2P20592 715 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 CTNNA2P26232 953 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 OR1E1P30953 314 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 SLC6A4P31645 630 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 HSPA9P38646 679 aaKnown RBP8.7□□□□□ -1.02
PDGFC-205ENST00000506880 NOP2P46087 812 aaKnown RBP8.7□□□□□ -1.02
PDGFC-205ENST00000506880 NR2C2P49116 596 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 GALK1P51570 392 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 DGKEP52429 567 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 TPI1P60174 286 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 PITX1P78337 314 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-205ENST00000506880 CCZ1BP86790 482 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 CCZ1P86791 482 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-205ENST00000506880 OGDHQ02218 1023 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 ZBTB16Q05516 673 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 TNK2Q07912 1038 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 TFDP2Q14188 446 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 PPP2R5EQ16537 467 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 CDO1Q16878 200 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 INO80DQ53TQ3 878 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-205ENST00000506880 C2CD6Q53TS8 623 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 RAP1GAP2Q684P5 730 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 TRIM68Q6AZZ1 485 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 SCYL2Q6P3W7 929 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 RAD9BQ6WBX8 426 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 NLRP14Q86W24 1093 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 CCDC105Q8IYK2 499 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 KATNAL2Q8IYT4 538 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 RCOR2Q8IZ40 523 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 UBL4BQ8N7F7 174 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 EXD1Q8NHP7 514 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 ADAM32Q8TC27 787 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 ARHGEF26Q96DR7 871 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 LRIG1Q96JA1 1093 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 ZFYVE19Q96K21 471 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 LMLNQ96KR4 655 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 PRICKLE1Q96MT3 831 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-205ENST00000506880 ZNF599Q96NL3 588 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 NECAB3Q96P71 396 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-205ENST00000506880 GABRG3Q99928 467 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 SNRNP25Q9BV90 132 aaKnown RBP8.7□□□□□ -1.02
PDGFC-205ENST00000506880 FRMD8P1Q9BZ68 369 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-205ENST00000506880 ELOVL2Q9NXB9 296 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 THAP10Q9P2Z0 257 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-205ENST00000506880 ZNF212Q9UDV6 495 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 EBF1Q9UH73 591 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 GGA2Q9UJY4 613 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 HS3ST2Q9Y278 367 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 KMT2EQ8IZD2 1858 aa8.7□□□□□ -1.02
PDGFC-205ENST00000506880 OTOL1A6NHN0 477 aaPredicted RBP8.69□□□□□ -1.02
PDGFC-205ENST00000506880 ARHGAP42A6NI28 874 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 SHISA7A6NL88 538 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 EEF2KO00418 725 aaKnown RBP8.69□□□□□ -1.02
PDGFC-205ENST00000506880 MTSS1O43312 755 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 ATMINO43313 823 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms