RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 PNISRQ8TF01 805 aaKnown RBP6.42□□□□□ -1.38
NIPBL-205ENST00000505998 PAGR1Q9BTK6 254 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 EFHD1Q9BUP0 239 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 NUAK2Q9H093 628 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 KCNK9Q9NPC2 374 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 ARL8BQ9NVJ2 186 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 FLRT1Q9NZU1 646 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 GRHPRQ9UBQ7 328 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 NRKQ7Z2Y5 1582 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 NHSL1Q5SYE7 1610 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 KIF1AQ12756 1690 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 ROCK2O75116 1388 aaKnown RBP6.42□□□□□ -1.38
NIPBL-205ENST00000505998 ATP7BP35670 1465 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 LOC105369274A0A096LPK9 316 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 LOC102723532A0A0G2JNH3 316 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 NBNO60934 754 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 PPP6R2O75170 966 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 CERS1P27544 350 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 FOXF2Q12947 444 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 KPNB1Q14974 876 aaKnown RBP6.41□□□□□ -1.38
NIPBL-205ENST00000505998 AAK1Q2M2I8 961 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 TRIM60Q495X7 471 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 SULT6B1Q6IMI4 303 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 LIN54Q6MZP7 749 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 MIS18BP1Q6P0N0 1132 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 ERAP2Q6P179 960 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 ZNF813Q6ZN06 617 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 RAB11FIP2Q7L804 512 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 CERS3Q8IU89 383 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 OR4N4Q8N0Y3 316 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 NTN5Q8WTR8 489 aaPredicted RBP6.41□□□□□ -1.38
NIPBL-205ENST00000505998 HMGB4Q8WW32 186 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 CCT6BQ92526 530 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 ELOVL1Q9BW60 279 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 BRD8Q9H0E9 1235 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 CNTN6Q9UQ52 1028 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 EIF3AQ14152 1382 aaKnown RBP6.41□□□□□ -1.38
NIPBL-205ENST00000505998 USP47Q96K76 1375 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 ANKARQ7Z5J8 1434 aa6.41□□□□□ -1.38
NIPBL-205ENST00000505998 FAM90A18PA6NE21 464 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 FAM90A16PA6NEW6 464 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 FAM90A9PA6NNJ1 464 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 EFCAB8A8MWE9 144 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 FAM90A5PA8MXJ8 464 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 M0QYT0 321 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 NKX2-8O15522 239 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 LARGE1O95461 756 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 LATS1O95835 1130 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 TUBB4AP04350 444 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 FAM90A15PP0C7V4 464 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 FAM90A14PP0C7W9 464 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 NDUFS1P28331 727 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 TACR3P29371 465 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 MPGP29372 298 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 SLC8A1P32418 973 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 AGTR2P50052 363 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 SF3A3Q12874 501 aaKnown RBP eCLIP6.4□□□□□ -1.38
NIPBL-205ENST00000505998 GAB1Q13480 694 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 DHX8Q14562 1220 aaKnown RBP6.4□□□□□ -1.38
NIPBL-205ENST00000505998 ZNF268Q14587 947 aaPredicted RBP6.4□□□□□ -1.38
NIPBL-205ENST00000505998 KIAA1614Q5VZ46 1190 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 ANO1Q5XXA6 986 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 WDR93Q6P2C0 686 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 NFRKBQ6P4R8 1299 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 KYAT3Q6YP21 454 aaKnown RBP6.4□□□□□ -1.38
NIPBL-205ENST00000505998 SCAMP5Q8TAC9 235 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 OSR1Q8TAX0 266 aaPredicted RBP6.4□□□□□ -1.38
NIPBL-205ENST00000505998 STT3BQ8TCJ2 826 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 TRAPPC12Q8WVT3 735 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 DDB2Q92466 427 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 SORBS1Q9BX66 1292 aaKnown RBP6.4□□□□□ -1.38
NIPBL-205ENST00000505998 SEMA4CQ9C0C4 833 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 PABPC3Q9H361 631 aaKnown RBP6.4□□□□□ -1.38
NIPBL-205ENST00000505998 MLXIPQ9HAP2 919 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 AGO4Q9HCK5 861 aaKnown RBP6.4□□□□□ -1.38
NIPBL-205ENST00000505998 PRDM8Q9NQV8 689 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 ADARB2Q9NS39 739 aaKnown RBP6.4□□□□□ -1.38
NIPBL-205ENST00000505998 ASNSD1Q9NWL6 643 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 ZBTB1Q9Y2K1 713 aa6.4□□□□□ -1.38
NIPBL-205ENST00000505998 SIRT4Q9Y6E7 314 aaPredicted RBP6.4□□□□□ -1.38
NIPBL-205ENST00000505998 CRYBG1Q9Y4K1 1723 aa6.39□□□□□ -1.39
NIPBL-205ENST00000505998 PPP6CO00743 305 aa6.39□□□□□ -1.39
NIPBL-205ENST00000505998 PRYO14603 147 aa6.39□□□□□ -1.39
NIPBL-205ENST00000505998 HOXD12P35452 270 aa6.39□□□□□ -1.39
NIPBL-205ENST00000505998 GRK6P43250 576 aa6.39□□□□□ -1.39
NIPBL-205ENST00000505998 RNASELQ05823 741 aaKnown RBP6.39□□□□□ -1.39
NIPBL-205ENST00000505998 SRSF4Q08170 494 aaKnown RBP6.39□□□□□ -1.39
NIPBL-205ENST00000505998 RPS6KA2Q15349 733 aa6.39□□□□□ -1.39
NIPBL-205ENST00000505998 TIGD6Q17RP2 521 aa6.39□□□□□ -1.39
NIPBL-205ENST00000505998 CEP78Q5JTW2 689 aa6.39□□□□□ -1.39
NIPBL-205ENST00000505998 TANGO2Q6ICL3 276 aa6.39□□□□□ -1.39
NIPBL-205ENST00000505998 ZNF398Q8TD17 642 aa6.39□□□□□ -1.39
NIPBL-205ENST00000505998 TESK2Q96S53 571 aa6.39□□□□□ -1.39
NIPBL-205ENST00000505998 SENP7Q9BQF6 1050 aa6.39□□□□□ -1.39
NIPBL-205ENST00000505998 MECRQ9BV79 373 aa6.39□□□□□ -1.39
NIPBL-205ENST00000505998 MYLK2Q9H1R3 596 aa6.39□□□□□ -1.39
NIPBL-205ENST00000505998 VPS16Q9H269 839 aa6.39□□□□□ -1.39
NIPBL-205ENST00000505998 ELAC1Q9H777 363 aaKnown RBP6.39□□□□□ -1.39
NIPBL-205ENST00000505998 PPCSQ9HAB8 311 aa6.39□□□□□ -1.39
NIPBL-205ENST00000505998 RAB21Q9UL25 225 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms