RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 RETREG1Q9H6L5 497 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 CNOT10Q9H9A5 744 aaKnown RBP8.28□□□□□ -1.08
COL4A5-208ENST00000505728 LRRC4CQ9HCJ2 640 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 EIF2B3Q9NR50 452 aaKnown RBP8.28□□□□□ -1.08
COL4A5-208ENST00000505728 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.28□□□□□ -1.08
COL4A5-208ENST00000505728 OSER1Q9NX31 292 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 IGSF9Q9P2J2 1179 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 FETUBQ9UGM5 382 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 LGALS13Q9UHV8 139 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 TRHDEQ9UKU6 1024 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 YBX2Q9Y2T7 364 aaKnown RBP8.28□□□□□ -1.08
COL4A5-208ENST00000505728 SHROOM3Q8TF72 1996 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 GOLGA8MH3BSY2 632 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 RNF103O00237 685 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 PSMD3O43242 534 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 MSI1O43347 362 aaKnown RBP8.27□□□□□ -1.09
COL4A5-208ENST00000505728 CDH16O75309 829 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 METTL18O95568 372 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 FGBP02675 491 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 URODP06132 367 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 SRGAP2BP0DMP2 458 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 CCNCP24863 283 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 GARSP41250 739 aaKnown RBP8.27□□□□□ -1.09
COL4A5-208ENST00000505728 MMP13P45452 471 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 PPP3CCP48454 512 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 TUBP50607 506 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 NRLP54845 237 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 MAGOHP61326 146 aaKnown RBP8.27□□□□□ -1.09
COL4A5-208ENST00000505728 PPP2R2AP63151 447 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 CREMQ03060 361 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 WASHC5Q12768 1159 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 EFEMP1Q12805 493 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 NR1H3Q13133 447 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 C10orf120Q5SQS8 335 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 UBAP2Q5T6F2 1119 aaKnown RBP8.27□□□□□ -1.09
COL4A5-208ENST00000505728 RWDD4Q6NW29 188 aaKnown RBP8.27□□□□□ -1.09
COL4A5-208ENST00000505728 FAM117BQ6P1L5 589 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 PSRC1Q6PGN9 363 aaPredicted RBP8.27□□□□□ -1.09
COL4A5-208ENST00000505728 KLHDC10Q6PID8 442 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 LRRC31Q6UY01 552 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 OTOP2Q7RTS6 562 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 PID1Q7Z2X4 250 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 CCDC13Q8IYE1 715 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 SH2D3CQ8N5H7 860 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 GPR152Q8TDT2 470 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 EPS8L3Q8TE67 593 aaKnown RBP8.27□□□□□ -1.09
COL4A5-208ENST00000505728 GIPC2Q8TF65 315 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 BTN2A3PQ96KV6 586 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 MYRFLQ96LU7 910 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 YME1L1Q96TA2 773 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 LGMNQ99538 433 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 CAPS2Q9BXY5 557 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 NKX2-4Q9H2Z4 354 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 VPS37BQ9H9H4 285 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 XAB2Q9HCS7 855 aaKnown RBP8.27□□□□□ -1.09
COL4A5-208ENST00000505728 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.27□□□□□ -1.09
COL4A5-208ENST00000505728 MARCH2Q9P0N8 246 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 PPARGC1AQ9UBK2 798 aaKnown RBP8.27□□□□□ -1.09
COL4A5-208ENST00000505728 SLC24A2Q9UI40 661 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 NUDT5Q9UKK9 219 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 HBS1LQ9Y450 684 aaKnown RBP8.27□□□□□ -1.09
COL4A5-208ENST00000505728 PCDHB12Q9Y5F1 795 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 SNX10Q9Y5X0 201 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 HS3ST4Q9Y661 456 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 MRPL42Q9Y6G3 142 aaKnown RBP8.27□□□□□ -1.09
COL4A5-208ENST00000505728 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.27□□□□□ -1.09
COL4A5-208ENST00000505728 BRWD1Q9NSI6 2320 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 COL4A6Q14031 1691 aa8.27□□□□□ -1.09
COL4A5-208ENST00000505728 SLC12A8A0AV02 714 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 SRRM3A6NNA2 597 aaPredicted RBP8.26□□□□□ -1.09
COL4A5-208ENST00000505728 DRGXA6NNA5 263 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 ERI2A8K979 691 aaKnown RBP8.26□□□□□ -1.09
COL4A5-208ENST00000505728 E9PAM4 449 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 TRDMT1O14717 391 aaKnown RBP8.26□□□□□ -1.09
COL4A5-208ENST00000505728 SHOX2O60902 331 aaPredicted RBP8.26□□□□□ -1.09
COL4A5-208ENST00000505728 SOAT2O75908 522 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 SEC24AO95486 1093 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 IGLV3-27P01718 113 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 MYOGP15173 224 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 RHOQP17081 205 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 RPL17P18621 184 aaKnown RBP8.26□□□□□ -1.09
COL4A5-208ENST00000505728 ATF6P18850 670 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 PTPN3P26045 913 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 ELF1P32519 619 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 ATP5C1P36542 298 aaKnown RBP8.26□□□□□ -1.09
COL4A5-208ENST00000505728 ELK3P41970 407 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 ALDH1A3P47895 512 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 LMAN1P49257 510 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 NDST2P52849 883 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 GPX6P59796 221 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 HTRA4P83105 476 aaPredicted RBP8.26□□□□□ -1.09
COL4A5-208ENST00000505728 GAD2Q05329 585 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 VEPH1Q14D04 833 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 TAF12Q16514 161 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 LONRF1Q17RB8 773 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 KLHL38Q2WGJ6 581 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 MSS51Q4VC12 460 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 TEX44Q53QW1 395 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 TJAP1Q5JTD0 557 aa8.26□□□□□ -1.09
COL4A5-208ENST00000505728 ARTNQ5T4W7 220 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms