RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 ITGA8P53708 1063 aa5.29□□□□□ -1.56
MATR3-211ENST00000505625 TFDP2Q14188 446 aa5.29□□□□□ -1.56
MATR3-211ENST00000505625 ZNF484Q5JVG2 852 aa5.29□□□□□ -1.56
MATR3-211ENST00000505625 EFHC1Q5JVL4 640 aa5.29□□□□□ -1.56
MATR3-211ENST00000505625 ZNF658Q5TYW1 1059 aaPredicted RBP5.29□□□□□ -1.56
MATR3-211ENST00000505625 ENPP7Q6UWV6 458 aa5.29□□□□□ -1.56
MATR3-211ENST00000505625 UBE2R2Q712K3 238 aaPredicted RBP5.29□□□□□ -1.56
MATR3-211ENST00000505625 CROCCP2Q86T23 111 aa5.29□□□□□ -1.56
MATR3-211ENST00000505625 DHX40Q8IX18 779 aaKnown RBP5.29□□□□□ -1.56
MATR3-211ENST00000505625 ULK2Q8IYT8 1036 aa5.29□□□□□ -1.56
MATR3-211ENST00000505625 MDM1Q8TC05 714 aa5.29□□□□□ -1.56
MATR3-211ENST00000505625 FAM151AQ8WW52 585 aa5.29□□□□□ -1.56
MATR3-211ENST00000505625 RAD54LQ92698 747 aa5.29□□□□□ -1.56
MATR3-211ENST00000505625 GTPBP3Q969Y2 492 aaKnown RBP5.29□□□□□ -1.56
MATR3-211ENST00000505625 DNAJA3Q96EY1 480 aa5.29□□□□□ -1.56
MATR3-211ENST00000505625 RABGEF1Q9UJ41 708 aa5.29□□□□□ -1.56
MATR3-211ENST00000505625 RPS6KA6Q9UK32 745 aa5.29□□□□□ -1.56
MATR3-211ENST00000505625 GAKO14976 1311 aa5.29□□□□□ -1.56
MATR3-211ENST00000505625 KDM4FA0A1W2PPD8 638 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 TTC34A8MYJ7 566 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 GCATO75600 419 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 CRTAMO95727 393 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 CSF2P04141 144 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 GPD1P21695 349 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 CMA1P23946 247 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 RFC5P40937 340 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 TUBP50607 506 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 SNRPD1P62314 119 aaKnown RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 SLC13A2Q13183 592 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 MYBPHQ13203 477 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 RUNX2Q13950 521 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 CBX2Q14781 532 aaPredicted RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 PSMD5Q16401 504 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 CBWD6Q4V339 395 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 SPATS2Q86XZ4 545 aaKnown RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 TMEM156Q8N614 296 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 GAB3Q8WWW8 586 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 AGPAT1Q99943 283 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 NIFKQ9BYG3 293 aaKnown RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 DCLK3Q9C098 648 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 ZMYND12Q9H0C1 365 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 ACSS2Q9NR19 701 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 KLHL28Q9NXS3 571 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 ZNF229Q9UJW7 825 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 TTC24A2A3L6 582 aaPredicted RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 FAM25EA8MYX2 175 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 MAGEB3O15480 346 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 AKAP10O43572 662 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 TRIM13O60858 407 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 GPC5P78333 572 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 RPP38P78345 283 aaKnown RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 SCN1BQ07699 218 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 GPAT2Q6NUI2 795 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 CTU1Q7Z7A3 348 aaKnown RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 GIPC3Q8TF64 312 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 BADQ92934 168 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 MTMR9Q96QG7 549 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 P2RX7Q99572 595 aaKnown RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 ALG2Q9H553 416 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 NHEJ1Q9H9Q4 299 aaPredicted RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 EDARQ9UNE0 448 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 MTF2Q9Y483 593 aaPredicted RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 URADA6NGE7 173 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 FAM25AB3EWG3 89 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 FAM25CB3EWG5 89 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 FAM25GB3EWG6 89 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 XPO1O14980 1071 aaKnown RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 CD3EAPO15446 510 aaKnown RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 ENO3P13929 434 aaPredicted RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 CASP1P29466 404 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 FMO4P31512 558 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 AVPR1BP47901 424 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 DDR2Q16832 855 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 HECTD2Q5U5R9 776 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 TRAF7Q6Q0C0 670 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 SARM1Q6SZW1 724 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 TPRG1Q6ZUI0 275 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 CHST9Q7L1S5 443 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 FBXW5Q969U6 566 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 SGIP1Q9BQI5 828 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 RANBP17Q9H2T7 1088 aaKnown RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 PIH1D1Q9NWS0 290 aaKnown RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 AHSPQ9NZD4 102 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 AP4E1Q9UPM8 1137 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 PHLPP1O60346 1717 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 RGS5O15539 181 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 CIAO1O76071 339 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 SLC35G4P0C7Q5 338 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 SMIM10L2AP0DMW4 78 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 SMIM10L2BP0DMW5 78 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 ZNF8P17098 575 aaPredicted RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 CFL1P23528 166 aaKnown RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 CYP2C18P33260 490 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 PRCPP42785 496 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 STX3Q13277 289 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 PTK6Q13882 451 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 ZSWIM7Q19AV6 140 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 BEND6Q5SZJ8 279 aaPredicted RBP5.28□□□□□ -1.56
MATR3-211ENST00000505625 CYP2U1Q7Z449 544 aa5.28□□□□□ -1.56
MATR3-211ENST00000505625 TDRPQ86YL5 185 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms