RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-255	ENST00000504927	TMC6	Q7Z403	805 aa		21.31	■■□□□ 1
DDR1-255	ENST00000504927	ZNF683	Q8IZ20	524 aa		21.31	■■□□□ 1
DDR1-255	ENST00000504927	NTAN1	Q96AB6	310 aa		21.31	■■□□□ 1
DDR1-255	ENST00000504927	MRFAP1L1	Q96HT8	127 aa		21.31	■■□□□ 1
DDR1-255	ENST00000504927	NCAPG	Q9BPX3	1015 aa		21.31	■■□□□ 1
DDR1-255	ENST00000504927	CACNA2D2	Q9NY47	1150 aa		21.31	■■□□□ 1
DDR1-255	ENST00000504927	PPARGC1A	Q9UBK2	798 aa	Known RBP	21.31	■■□□□ 1
DDR1-255	ENST00000504927	OR12D3	Q9UGF7	316 aa		21.31	■■□□□ 1
DDR1-255	ENST00000504927	CFAP54	Q96N23	3096 aa		21.31	■■□□□ 1
DDR1-255	ENST00000504927	IGLV3-10	A0A075B6K4	115 aa		21.3	■■□□□ 1
DDR1-255	ENST00000504927		E9PAM4	449 aa		21.3	■■□□□ 1
DDR1-255	ENST00000504927	CCP110	O43303	1012 aa		21.3	■■□□□ 1
DDR1-255	ENST00000504927	LMNA	P02545	664 aa	Known RBP	21.3	■■□□□ 1
DDR1-255	ENST00000504927	WAS	P42768	502 aa		21.3	■■□□□ 1
DDR1-255	ENST00000504927	PXN	P49023	591 aa	Predicted RBP	21.3	■■□□□ 1
DDR1-255	ENST00000504927	ADK	P55263	362 aa	Known RBP	21.3	■■□□□ 1
DDR1-255	ENST00000504927	ZNF234	Q14588	700 aa		21.3	■■□□□ 1
DDR1-255	ENST00000504927	STARD3	Q14849	445 aa		21.3	■■□□□ 1
DDR1-255	ENST00000504927	ASCL5	Q7RTU5	278 aa		21.3	■■□□□ 1
DDR1-255	ENST00000504927	SLFN11	Q7Z7L1	901 aa		21.3	■■□□□ 1
DDR1-255	ENST00000504927	DNAAF5	Q86Y56	855 aa		21.3	■■□□□ 1
DDR1-255	ENST00000504927	EPC1	Q9H2F5	836 aa		21.3	■■□□□ 1
DDR1-255	ENST00000504927	DEF6	Q9H4E7	631 aa		21.3	■■□□□ 1
DDR1-255	ENST00000504927	TBC1D30	Q9Y2I9	924 aa		21.3	■■□□□ 1
DDR1-255	ENST00000504927		A0A1W2PQF6	199 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	WASH3P	C4AMC7	463 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	ATMIN	O43313	823 aa	Predicted RBP	21.29	■■□□□ 1
DDR1-255	ENST00000504927	HR	O43593	1189 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	SYNCRIP	O60506	623 aa	Known RBP	21.29	■■□□□ 1
DDR1-255	ENST00000504927	SRGAP2	O75044	1071 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	PSMA2	P25787	234 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	IL12RB1	P42701	662 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	ZNF75D	P51815	510 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	SULT2A1	Q06520	285 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	SCAP	Q12770	1279 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	ACAP1	Q15027	740 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	SLC18A3	Q16572	532 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	FUT11	Q495W5	492 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	USP39	Q53GS9	565 aa	Known RBP	21.29	■■□□□ 1
DDR1-255	ENST00000504927	RAB6C	Q53S08	254 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	PITRM1	Q5JRX3	1037 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	ANO7	Q6IWH7	933 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	SCYL2	Q6P3W7	929 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	SERPINA13P	Q6UXR4	307 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	SETD3	Q86TU7	594 aa	Predicted RBP	21.29	■■□□□ 1
DDR1-255	ENST00000504927	KDM1B	Q8NB78	822 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	SORCS1	Q8WY21	1168 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	RAB6C	Q9H0N0	254 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	TMPRSS4	Q9NRS4	437 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	MYO1A	Q9UBC5	1043 aa		21.29	■■□□□ 1
DDR1-255	ENST00000504927	INTS6	Q9UL03	887 aa	Known RBP	21.29	■■□□□ 1
DDR1-255	ENST00000504927	TCRBV21S2A2	A0A5A6	115 aa		21.28	■■□□□ 1
DDR1-255	ENST00000504927	RNF8	O76064	485 aa		21.28	■■□□□ 1
DDR1-255	ENST00000504927	GGCX	P38435	758 aa		21.28	■■□□□ 1
DDR1-255	ENST00000504927	CSK	P41240	450 aa		21.28	■■□□□ 1
DDR1-255	ENST00000504927	ST8SIA6	P61647	398 aa		21.28	■■□□□ 1
DDR1-255	ENST00000504927	OGDH	Q02218	1023 aa		21.28	■■□□□ 1
DDR1-255	ENST00000504927	BYSL	Q13895	437 aa	Known RBP	21.28	■■□□□ 1
DDR1-255	ENST00000504927	PTPRN	Q16849	979 aa		21.28	■■□□□ 1
DDR1-255	ENST00000504927	ASTE1	Q2TB18	679 aa	Predicted RBP	21.28	■■□□□ 1
DDR1-255	ENST00000504927	PLEKHG6	Q3KR16	790 aa		21.28	■■□□□ 1
DDR1-255	ENST00000504927	FNDC3B	Q53EP0	1204 aa	Known RBP	21.28	■■□□□ 1
DDR1-255	ENST00000504927	CIR1	Q86X95	450 aa	Predicted RBP	21.28	■■□□□ 1
DDR1-255	ENST00000504927	MDGA1	Q8NFP4	955 aa		21.28	■■□□□ 1
DDR1-255	ENST00000504927	GAB3	Q8WWW8	586 aa		21.28	■■□□□ 1
DDR1-255	ENST00000504927	CCDC42	Q96M95	316 aa		21.28	■■□□□ 1
DDR1-255	ENST00000504927	ZYG11B	Q9C0D3	744 aa		21.28	■■□□□ 1
DDR1-255	ENST00000504927	THAP2	Q9H0W7	228 aa		21.28	■■□□□ 1
DDR1-255	ENST00000504927	TMEM245	Q9H330	911 aa		21.28	■■□□□ 1
DDR1-255	ENST00000504927	BCCIP	Q9P287	314 aa	Known RBP eCLIP	21.28	■■□□□ 1
DDR1-255	ENST00000504927	SUN2	Q9UH99	717 aa		21.28	■■□□□ 1
DDR1-255	ENST00000504927	ZNF292	O60281	2723 aa		21.28	■■□□□ 1
DDR1-255	ENST00000504927	GVINP1	Q7Z2Y8	2422 aa		21.28	■■□□□ 1
DDR1-255	ENST00000504927	PRR23A	A6NEV1	266 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	AKR1B10	O60218	316 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	RPP40	O75818	363 aa	Known RBP	21.27	■■□□□ 1
DDR1-255	ENST00000504927	CNTN5	O94779	1100 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	CYP1A2	P05177	515 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	SRPRA	P08240	638 aa	Known RBP	21.27	■■□□□ 1
DDR1-255	ENST00000504927	ECT2L	Q008S8	904 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	GFPT1	Q06210	699 aa	Predicted RBP	21.27	■■□□□ 1
DDR1-255	ENST00000504927	SIM2	Q14190	667 aa	Predicted RBP	21.27	■■□□□ 1
DDR1-255	ENST00000504927	EFHC2	Q5JST6	749 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	C6orf118	Q5T5N4	469 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	CXorf57	Q6NSI4	855 aa	Known RBP	21.27	■■□□□ 1
DDR1-255	ENST00000504927	C11orf74	Q86VG3	221 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	PGBD3	Q8N328	593 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	CCDC185	Q8N715	623 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	SUMF1	Q8NBK3	374 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	CYB5D2	Q8WUJ1	264 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	HMGB4	Q8WW32	186 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	FEM1A	Q9BSK4	669 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	21.27	■■□□□ 1
DDR1-255	ENST00000504927	CD248	Q9HCU0	757 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	RAB23	Q9ULC3	237 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	NENF	Q9UMX5	172 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	SNX10	Q9Y5X0	201 aa		21.27	■■□□□ 1
DDR1-255	ENST00000504927	EP300	Q09472	2414 aa	Predicted RBP	21.26	■□□□□ 0.99
DDR1-255	ENST00000504927	MYO18A	Q92614	2054 aa	Known RBP	21.26	■□□□□ 0.99
DDR1-255	ENST00000504927	GFRA3	O60609	400 aa		21.26	■□□□□ 0.99

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms