RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 CACNA1BQ00975 2339 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 AKAP13Q12802 2813 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 I6L893 689 aaPredicted RBP13.21□□□□□ -0.29
RNF4-206ENST00000504782 MID1O15344 667 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 FSBPO95073 299 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 SEMA4FO95754 770 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 DNTTP04053 509 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 PRKCSHP14314 528 aaPredicted RBP13.21□□□□□ -0.29
RNF4-206ENST00000504782 PDGFRAP16234 1089 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 METAP1P53582 386 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 PTK2Q05397 1052 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 HLA-BQ31612 363 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 C2CD6Q53TS8 623 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 ZNF776Q68DI1 518 aaPredicted RBP13.21□□□□□ -0.29
RNF4-206ENST00000504782 FBXL22Q6P050 247 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 UNQ6494/PRO21346Q6UXR6 183 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 MMAAQ8IVH4 418 aaKnown RBP13.21□□□□□ -0.29
RNF4-206ENST00000504782 FAM71AQ8IYT1 594 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 CCAR2Q8N163 923 aaKnown RBP13.21□□□□□ -0.29
RNF4-206ENST00000504782 STK40Q8N2I9 435 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 PNPLA1Q8N8W4 532 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 ATP6V0D2Q8N8Y2 350 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 PTPRN2Q92932 1015 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 TUBGCP2Q9BSJ2 902 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 BTBD1Q9H0C5 482 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 NEUROG2Q9H2A3 272 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 PABPC3Q9H361 631 aaKnown RBP13.21□□□□□ -0.29
RNF4-206ENST00000504782 GAREM1Q9H706 876 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 TMPRSS4Q9NRS4 437 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.21□□□□□ -0.29
RNF4-206ENST00000504782 KIAA1522Q9P206 1035 aaPredicted RBP13.21□□□□□ -0.29
RNF4-206ENST00000504782 SNX10Q9Y5X0 201 aa13.21□□□□□ -0.29
RNF4-206ENST00000504782 PLXNB3Q9ULL4 1909 aa13.21□□□□□ -0.3
RNF4-206ENST00000504782 PTPRBP23467 1997 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 A0A1W2PP55 124 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 TYW5A2RUC4 315 aaKnown RBP13.2□□□□□ -0.3
RNF4-206ENST00000504782 FAM47DPA6NHR8 397 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 F5H5T6 163 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 PLK4O00444 970 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 ASLP04424 464 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 IGHV4-34P06331 123 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 KRT9P35527 623 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 ST8SIA6P61647 398 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 CDK17Q00537 523 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 ECT2LQ008S8 904 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 SLC6A3Q01959 620 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 NME3Q13232 169 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 DRAP1Q14919 205 aaPredicted RBP13.2□□□□□ -0.3
RNF4-206ENST00000504782 KIF19Q2TAC6 998 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 EFHC1Q5JVL4 640 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 CXorf57Q6NSI4 855 aaKnown RBP13.2□□□□□ -0.3
RNF4-206ENST00000504782 C11orf57Q6ZUT1 292 aaPredicted RBP13.2□□□□□ -0.3
RNF4-206ENST00000504782 NAXDQ8IW45 347 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 CHCHD4Q8N4Q1 142 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 GATA6Q92908 595 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 RNF34Q969K3 372 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 ALG14Q96F25 216 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 FAM81BQ96LP2 452 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 TM9SF3Q9HD45 589 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 ASNSD1Q9NWL6 643 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 FBXL12Q9NXK8 326 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 VANGL2Q9ULK5 521 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 SNX11Q9Y5W9 270 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 HS3ST4Q9Y661 456 aa13.2□□□□□ -0.3
RNF4-206ENST00000504782 ITIH6Q6UXX5 1313 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 WNT9AO14904 365 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 HSF2BPO75031 334 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 CBFA2T3O75081 653 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 DAB1O75553 588 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 ADCY5O95622 1261 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 PROS1P07225 676 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 GLI1P08151 1106 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 SRPRAP08240 638 aaKnown RBP13.19□□□□□ -0.3
RNF4-206ENST00000504782 ABCB4P21439 1286 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 CCR1P32246 355 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 KLK7P49862 253 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 GALCP54803 685 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 RNASE9P60153 205 aaKnown RBP13.19□□□□□ -0.3
RNF4-206ENST00000504782 ZBTB16Q05516 673 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 SLC14A1Q13336 389 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 AUHQ13825 339 aaKnown RBP13.19□□□□□ -0.3
RNF4-206ENST00000504782 RAPGEF1Q13905 1077 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 KCNJ12Q14500 433 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 ARID5BQ14865 1188 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 TRIP6Q15654 476 aaKnown RBP13.19□□□□□ -0.3
RNF4-206ENST00000504782 CST6Q15828 149 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 ARTNQ5T4W7 220 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 KLHDC7AQ5VTJ3 777 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 TAF3Q5VWG9 929 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 TRNP1Q6NT89 227 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 AADATQ8N5Z0 425 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 ZNF557Q8N988 423 aaPredicted RBP13.19□□□□□ -0.3
RNF4-206ENST00000504782 GANCQ8TET4 914 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 TRIM62Q9BVG3 475 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 NAA15Q9BXJ9 866 aaKnown RBP13.19□□□□□ -0.3
RNF4-206ENST00000504782 NUP62CLQ9H1M0 184 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 FBRSQ9HAH7 460 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 PIGVQ9NUD9 493 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 LMBRD1Q9NUN5 540 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 RALYQ9UKM9 306 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms