RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 IRF1P10914 325 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 MBL2P11226 248 aaPredicted RBP10.69□□□□□ -0.7
TPM3-217ENST00000504663 PTPN2P17706 415 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 RPL22P35268 128 aaKnown RBP10.69□□□□□ -0.7
TPM3-217ENST00000504663 COG7P83436 770 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 PPIDQ08752 370 aaKnown RBP10.69□□□□□ -0.7
TPM3-217ENST00000504663 WASHC5Q12768 1159 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 USP4Q13107 963 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 COL19A1Q14993 1142 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 BRD3Q15059 726 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 TRIP13Q15645 432 aaPredicted RBP10.69□□□□□ -0.7
TPM3-217ENST00000504663 TAF12Q16514 161 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 LRIT3Q3SXY7 679 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 FAM153CQ494X1 144 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 PABPC1LQ4VXU2 614 aaKnown RBP10.69□□□□□ -0.7
TPM3-217ENST00000504663 SLC45A4Q5BKX6 768 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 TCEAL5Q5H9L2 206 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 RFWD3Q6PCD5 774 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 SYCE2Q6PIF2 218 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 TMCO3Q6UWJ1 677 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 GRASPQ7Z6J2 395 aaPredicted RBP10.69□□□□□ -0.7
TPM3-217ENST00000504663 CHSY1Q86X52 802 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 UMODL1-AS1Q8N2C9 162 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 MAB21L3Q8N8X9 362 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 EIF1ADQ8N9N8 165 aaKnown RBP10.69□□□□□ -0.7
TPM3-217ENST00000504663 FAM71DQ8N9W8 422 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 OR52K2Q8NGK3 314 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 ITFG1Q8TB96 612 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 DEPDC1BQ8WUY9 529 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 HNRNPLLQ8WVV9 542 aaKnown RBP10.69□□□□□ -0.7
TPM3-217ENST00000504663 MRPS31Q92665 395 aaKnown RBP10.69□□□□□ -0.7
TPM3-217ENST00000504663 ART4Q93070 314 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 HDAC11Q96DB2 347 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 CCDC114Q96M63 670 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 ZSWIM3Q96MP5 696 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 LGMNQ99538 433 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 CDCA3Q99618 268 aaPredicted RBP10.69□□□□□ -0.7
TPM3-217ENST00000504663 MAK16Q9BXY0 300 aaKnown RBP10.69□□□□□ -0.7
TPM3-217ENST00000504663 TXLNGYQ9BZA5 131 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 SMG9Q9H0W8 520 aaKnown RBP10.69□□□□□ -0.7
TPM3-217ENST00000504663 ATXN3LQ9H3M9 355 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 TLE6Q9H808 572 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 TRPC7Q9HCX4 862 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 SMPD4Q9NXE4 827 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 FAM153AQ9UHL3 310 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 NFU1Q9UMS0 254 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 CCL26Q9Y258 94 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 SNX24Q9Y343 169 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 RAD54BQ9Y620 910 aa10.69□□□□□ -0.7
TPM3-217ENST00000504663 PRRC2BQ5JSZ5 2229 aaKnown RBP10.68□□□□□ -0.7
TPM3-217ENST00000504663 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.68□□□□□ -0.7
TPM3-217ENST00000504663 CCDC195A0A1B0GUA6 201 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 SOBPA7XYQ1 873 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 HACD1B0YJ81 288 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 SRGAP2BP0DMP2 458 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 TCF3P15923 654 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 HDCP19113 662 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 DDX6P26196 483 aaKnown RBP eCLIP10.68□□□□□ -0.7
TPM3-217ENST00000504663 CUL1Q13616 776 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 ZNF77Q15935 545 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 UBAP2Q5T6F2 1119 aaKnown RBP10.68□□□□□ -0.7
TPM3-217ENST00000504663 GPR158Q5T848 1215 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 RNASEH2BQ5TBB1 312 aaKnown RBP10.68□□□□□ -0.7
TPM3-217ENST00000504663 DENND1CQ8IV53 801 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 CDKL3Q8IVW4 592 aaPredicted RBP10.68□□□□□ -0.7
TPM3-217ENST00000504663 KLHDC8BQ8IXV7 354 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 IFT20Q8IY31 132 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 ELMOD1Q8N336 334 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 EFHBQ8N7U6 833 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 LEMD2Q8NC56 503 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 FBXO25Q8TCJ0 367 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 USP13Q92995 863 aaPredicted RBP10.68□□□□□ -0.7
TPM3-217ENST00000504663 RSPRY1Q96DX4 576 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 CELF6Q96J87 481 aaKnown RBP10.68□□□□□ -0.7
TPM3-217ENST00000504663 TRIM31Q9BZY9 425 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 ZYG11BQ9C0D3 744 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 SLC39A8Q9C0K1 460 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 RAB17Q9H0T7 212 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 NSUN3Q9H649 340 aaKnown RBP10.68□□□□□ -0.7
TPM3-217ENST00000504663 TASP1Q9H6P5 420 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 SFXN1Q9H9B4 322 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 WHRNQ9P202 907 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 ZNF148Q9UQR1 794 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 KIAA1549LQ6ZVL6 1849 aa10.68□□□□□ -0.7
TPM3-217ENST00000504663 COL4A2P08572 1712 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 TRIOBPQ9H2D6 2365 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 MYLKQ15746 1914 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 TRAV19A0A0A6YYK7 116 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 TCRBV7S3A2A0A539 114 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 CFAP69A5D8W1 941 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 GRXCR2A6NFK2 248 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 C5orf60A6NFR6 353 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 H7C0C1 242 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 LEFTY2O00292 366 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 SOX1O00570 391 aaPredicted RBP10.67□□□□□ -0.7
TPM3-217ENST00000504663 DNALI1O14645 258 aaPredicted RBP10.67□□□□□ -0.7
TPM3-217ENST00000504663 SCAMP3O14828 347 aaKnown RBP10.67□□□□□ -0.7
TPM3-217ENST00000504663 MAP3K13O43283 966 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 MAFKO60675 156 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 XYLBO75191 536 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms