RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 MTF2Q9Y483 593 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 SNX10Q9Y5X0 201 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 ADGRG1Q9Y653 693 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 CEP192Q8TEP8 1941 aa12.27□□□□□ -0.44
PDLIM5-208ENST00000504489 PRR33A8MZF0 331 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 CLDN11O75508 207 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 AOC1P19801 751 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 IL1R2P27930 398 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 HTR7P34969 479 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 MAGEA9P43362 315 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 RPS9P46781 194 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 CDH4P55283 916 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 SLC25A11Q02978 314 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 MESP2Q0VG99 397 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 KIF5AQ12840 1032 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 SEMA3BQ13214 749 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 CAMK2BQ13554 666 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 LRRC32Q14392 662 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 HADHQ16836 314 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 FBXO43Q4G163 708 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 DAB2IPQ5VWQ8 1189 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 KIAA0907Q7Z7F0 614 aaPredicted RBP12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 MFN1Q8IWA4 741 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 CCDC117Q8IWD4 279 aaPredicted RBP12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 CCAR2Q8N163 923 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 SYNPOQ8N3V7 929 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 TEKT4Q8WW24 435 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 LMLNQ96KR4 655 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 DESI2Q9BSY9 194 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 SNRNP25Q9BV90 132 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 MAGEB5Q9BZ81 275 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 LMAN1LQ9HAT1 526 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 SALL4Q9UJQ4 1053 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 AP4E1Q9UPM8 1137 aa12.27□□□□□ -0.45
PDLIM5-208ENST00000504489 SPAG17Q6Q759 2223 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 TBC1D3BA6NDS4 549 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 FAM72CH0Y354 149 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 K7EQS6 105 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 TRIM24O15164 1050 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 SRGAP2O75044 1071 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 LRIG2O94898 1065 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 EGFP01133 1207 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 PTMAP06454 111 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 TCF4P15884 667 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 HLA-FP30511 346 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 HOXC13P31276 330 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 SLC1A1P43005 524 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 IRAK1P51617 712 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 ZNF135P52742 658 aaPredicted RBP12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 OXCT1P55809 520 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 KDSRQ06136 332 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 SLC12A1Q13621 1099 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 CDH18Q13634 790 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 ALFQ53S48 1182 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 TMEM31Q5JXX7 168 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 FAM72AQ5TYM5 149 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 FAM72DQ6L9T8 149 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 FAM72BQ86X60 149 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 PYROXD2Q8N2H3 581 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 CARNMT1Q8N4J0 409 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 TPCN2Q8NHX9 752 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 CCDC26Q8TAB7 109 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 WFDC5Q8TCV5 224 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 KCNV2Q8TDN2 545 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 WFIKKN2Q8TEU8 576 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 EZH1Q92800 747 aaPredicted RBP12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 TBC1D31Q96DN5 1066 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 PPP1R9BQ96SB3 815 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 EPAS1Q99814 870 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 ZYG11BQ9C0D3 744 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 DHX35Q9H5Z1 703 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 DLGAP2Q9P1A6 1054 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 KIAA1522Q9P206 1035 aaPredicted RBP12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 TBC1D30Q9Y2I9 924 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 STARD13Q9Y3M8 1113 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 DUSP10Q9Y6W6 482 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 PLXND1Q9Y4D7 1925 aa12.26□□□□□ -0.45
PDLIM5-208ENST00000504489 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 FAM86C2PA6NEL3 165 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 TMEM110-MUSTN1A8MSY1 372 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 PRRT4C9JH25 899 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 H0Y626 953 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 TIMM44O43615 452 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 PI15O43692 258 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 BUB1BO60566 1050 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 CNTN5O94779 1100 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 KRT7P08729 469 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 CCDC175P0C221 793 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 RARAP10276 462 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 RHOQP17081 205 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 HCAR3P49019 387 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 PLK1P53350 603 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 TAS2R40P59535 323 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 MRPS21P82921 87 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 CCDC173Q0VFZ6 552 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 ZNF177Q13360 481 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 DMC1Q14565 340 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 DPYSL2Q16555 572 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 IFI16Q16666 785 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms