RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 SPATA13Q96N96 652 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 MECRQ9BV79 373 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 FRMD8Q9BZ67 464 aaPredicted RBP7.23□□□□□ -1.25
SNX25-202ENST00000504273 MANSC1Q9H8J5 431 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 RCOR3Q9P2K3 495 aaPredicted RBP7.23□□□□□ -1.25
SNX25-202ENST00000504273 EMCNQ9ULC0 261 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 USH1CQ9Y6N9 552 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 MYO16Q9Y6X6 1858 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 BDP1A6H8Y1 2624 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 SYNJ2BP-COX16A0A087WUM0 186 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 C9IYK1 514 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 F8W810 466 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 I3L4J1 428 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 DLDP09622 509 aaKnown RBP7.23□□□□□ -1.25
SNX25-202ENST00000504273 CYBAP13498 195 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 ZFXP17010 805 aaPredicted RBP7.23□□□□□ -1.25
SNX25-202ENST00000504273 ADRA1BP35368 520 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 GJA9P57773 515 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 RIPK1Q13546 671 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 E2F5Q15329 346 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 UPP1Q16831 310 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 TIGD5Q53EQ6 642 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 CXCL17Q6UXB2 119 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 MRPL10Q7Z7H8 261 aaKnown RBP7.23□□□□□ -1.25
SNX25-202ENST00000504273 FAM35AQ86V20 835 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 PSTKQ8IV42 348 aaKnown RBP7.23□□□□□ -1.25
SNX25-202ENST00000504273 PDCD7Q8N8D1 485 aaKnown RBP7.23□□□□□ -1.25
SNX25-202ENST00000504273 COLGALT1Q8NBJ5 622 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 TFB1MQ8WVM0 346 aaKnown RBP7.23□□□□□ -1.25
SNX25-202ENST00000504273 ALKBH8Q96BT7 664 aaKnown RBP7.23□□□□□ -1.25
SNX25-202ENST00000504273 LRRC39Q96DD0 335 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 FCRL3Q96P31 734 aaPredicted RBP7.23□□□□□ -1.25
SNX25-202ENST00000504273 TMEM237Q96Q45 408 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 SRPK1Q96SB4 655 aaKnown RBP7.23□□□□□ -1.25
SNX25-202ENST00000504273 TMEM209Q96SK2 561 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 APBA2Q99767 749 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 AP5M1Q9H0R1 490 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 PRDM12Q9H4Q4 367 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 NOD2Q9HC29 1040 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 NPHS2Q9NP85 383 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 KRT82Q9NSB4 513 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 COX16Q9P0S2 106 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 PLLPQ9Y342 182 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 PSAT1Q9Y617 370 aa7.23□□□□□ -1.25
SNX25-202ENST00000504273 IQANK1A0A1B0GTG1 560 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 CFAP73A6NFT4 308 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 HACD1B0YJ81 288 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 RNF103O00237 685 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 C2CD2LO14523 706 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 IL1BP01584 269 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 CD68P34810 354 aaPredicted RBP7.22□□□□□ -1.25
SNX25-202ENST00000504273 SNX16P57768 344 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 NKX3-2P78367 333 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 TEX44Q53QW1 395 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 LRRC8BQ6P9F7 803 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 RFX8Q6ZV50 586 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 CYS1Q717R9 158 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 SERINC5Q86VE9 423 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 LRRTM3Q86VH5 581 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 VPS52Q8N1B4 723 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 GSDMBQ8TAX9 411 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 MAGEC3Q8TD91 643 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 TRIB2Q92519 343 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 ERP27Q96DN0 273 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 UPF3AQ9H1J1 476 aaKnown RBP7.22□□□□□ -1.25
SNX25-202ENST00000504273 MTIF3Q9H2K0 278 aaKnown RBP7.22□□□□□ -1.25
SNX25-202ENST00000504273 CSNK1G1Q9HCP0 422 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 MKS1Q9NXB0 559 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 FBXW11Q9UKB1 542 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 TRPV2Q9Y5S1 764 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 PLXNA3P51805 1871 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 SF3B1O75533 1304 aaKnown RBP eCLIP7.22□□□□□ -1.252e-7■■■■■ 103.4
SNX25-202ENST00000504273 XPOTO43592 962 aaKnown RBP7.22□□□□□ -1.25
SNX25-202ENST00000504273 B4GALT3O60512 393 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 DUSP11O75319 330 aaKnown RBP7.22□□□□□ -1.25
SNX25-202ENST00000504273 UPP2O95045 317 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 PGK1P00558 417 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 INHBAP08476 426 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 F7P08709 466 aaPredicted RBP7.22□□□□□ -1.25
SNX25-202ENST00000504273 GSTA2P09210 222 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 USP17L7P0C7H9 530 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 IGFBP4P22692 258 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 TARSP26639 723 aaKnown RBP7.22□□□□□ -1.25
SNX25-202ENST00000504273 PSMB4P28070 264 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 RGS2P41220 211 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 SKIV2L2P42285 1042 aaKnown RBP7.22□□□□□ -1.25
SNX25-202ENST00000504273 SERPINB4P48594 390 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 SCNN1GP51170 649 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 SCAPQ12770 1279 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 NME3Q13232 169 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 DSC3Q14574 896 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 WLSQ5T9L3 541 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 HEATR6Q6AI08 1181 aaKnown RBP7.22□□□□□ -1.25
SNX25-202ENST00000504273 C4orf22Q6V702 233 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 GJD3Q8N144 294 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 HLA-CQ95604 372 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 FAM149B1Q96BN6 582 aa7.22□□□□□ -1.25
SNX25-202ENST00000504273 PGAP3Q96FM1 320 aaPredicted RBP7.22□□□□□ -1.25
SNX25-202ENST00000504273 ZNF419Q96HQ0 510 aaPredicted RBP7.22□□□□□ -1.25
SNX25-202ENST00000504273 SYT15Q9BQS2 421 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms