RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 LUC7LQ9NQ29 371 aaKnown RBP16.99■□□□□ 0.31
SCLT1-205ENST00000503401 SALL4Q9UJQ4 1053 aa16.99■□□□□ 0.31
SCLT1-205ENST00000503401 NEU3Q9UQ49 428 aa16.99■□□□□ 0.31
SCLT1-205ENST00000503401 DUSP10Q9Y6W6 482 aa16.99■□□□□ 0.31
SCLT1-205ENST00000503401 USP34Q70CQ2 3546 aa16.99■□□□□ 0.31
SCLT1-205ENST00000503401 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.98■□□□□ 0.31
SCLT1-205ENST00000503401 MTA2O94776 668 aa16.98■□□□□ 0.31
SCLT1-205ENST00000503401 HOXC13P31276 330 aa16.98■□□□□ 0.31
SCLT1-205ENST00000503401 GJC1P36383 396 aa16.98■□□□□ 0.31
SCLT1-205ENST00000503401 AIF1P55008 147 aa16.98■□□□□ 0.31
SCLT1-205ENST00000503401 CDH4P55283 916 aa16.98■□□□□ 0.31
SCLT1-205ENST00000503401 SLC25A11Q02978 314 aaKnown RBP16.98■□□□□ 0.31
SCLT1-205ENST00000503401 ZNF177Q13360 481 aaPredicted RBP16.98■□□□□ 0.31
SCLT1-205ENST00000503401 FUT11Q495W5 492 aa16.98■□□□□ 0.31
SCLT1-205ENST00000503401 ACBD5Q5T8D3 534 aaPredicted RBP16.98■□□□□ 0.31
SCLT1-205ENST00000503401 NUDT18Q6ZVK8 323 aa16.98■□□□□ 0.31
SCLT1-205ENST00000503401 ADIPOR2Q86V24 386 aa16.98■□□□□ 0.31
SCLT1-205ENST00000503401 ALLCQ8N6M5 410 aa16.98■□□□□ 0.31
SCLT1-205ENST00000503401 ZNF513Q8N8E2 541 aaPredicted RBP16.98■□□□□ 0.31
SCLT1-205ENST00000503401 USP33Q8TEY7 942 aa16.98■□□□□ 0.31
SCLT1-205ENST00000503401 HSPH1Q92598 858 aa16.98■□□□□ 0.31
SCLT1-205ENST00000503401 KCTD15Q96SI1 283 aaPredicted RBP16.98■□□□□ 0.31
SCLT1-205ENST00000503401 ACOX2Q99424 681 aa16.98■□□□□ 0.31
SCLT1-205ENST00000503401 ZYG11BQ9C0D3 744 aa16.98■□□□□ 0.31
SCLT1-205ENST00000503401 LACRTQ9GZZ8 138 aa16.98■□□□□ 0.31
SCLT1-205ENST00000503401 INTS6Q9UL03 887 aaKnown RBP16.98■□□□□ 0.31
SCLT1-205ENST00000503401 HYOU1Q9Y4L1 999 aa16.98■□□□□ 0.31
SCLT1-205ENST00000503401 CLDN11O75508 207 aa16.97■□□□□ 0.31
SCLT1-205ENST00000503401 MZF1P28698 734 aaPredicted RBP16.97■□□□□ 0.31
SCLT1-205ENST00000503401 L1CAMP32004 1257 aa16.97■□□□□ 0.31
SCLT1-205ENST00000503401 CSKP41240 450 aa16.97■□□□□ 0.31
SCLT1-205ENST00000503401 WASP42768 502 aa16.97■□□□□ 0.31
SCLT1-205ENST00000503401 TAS2R40P59535 323 aa16.97■□□□□ 0.31
SCLT1-205ENST00000503401 NRG1Q02297 640 aaPredicted RBP16.97■□□□□ 0.31
SCLT1-205ENST00000503401 PPP6R3Q5H9R7 873 aaPredicted RBP16.97■□□□□ 0.31
SCLT1-205ENST00000503401 KIAA1328Q86T90 577 aa16.97■□□□□ 0.31
SCLT1-205ENST00000503401 APCDD1Q8J025 514 aa16.97■□□□□ 0.31
SCLT1-205ENST00000503401 AHI1Q8N157 1196 aa16.97■□□□□ 0.31
SCLT1-205ENST00000503401 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.97■□□□□ 0.31
SCLT1-205ENST00000503401 IL17RCQ8NAC3 791 aa16.97■□□□□ 0.31
SCLT1-205ENST00000503401 CYB5D2Q8WUJ1 264 aa16.97■□□□□ 0.31
SCLT1-205ENST00000503401 ANP32BQ92688 251 aaKnown RBP16.97■□□□□ 0.31
SCLT1-205ENST00000503401 TBC1D31Q96DN5 1066 aa16.97■□□□□ 0.31
SCLT1-205ENST00000503401 ERLEC1Q96DZ1 483 aa16.97■□□□□ 0.31
SCLT1-205ENST00000503401 GOLPH3Q9H4A6 298 aa16.97■□□□□ 0.31
SCLT1-205ENST00000503401 NDFIP2Q9NV92 336 aa16.97■□□□□ 0.31
SCLT1-205ENST00000503401 ELOVL2Q9NXB9 296 aa16.97■□□□□ 0.31
SCLT1-205ENST00000503401 KIAA1522Q9P206 1035 aaPredicted RBP16.97■□□□□ 0.31
SCLT1-205ENST00000503401 PPARGC1AQ9UBK2 798 aaKnown RBP16.97■□□□□ 0.31
SCLT1-205ENST00000503401 NUP205Q92621 2012 aa16.97■□□□□ 0.31
SCLT1-205ENST00000503401 BUB1O43683 1085 aa16.96■□□□□ 0.31
SCLT1-205ENST00000503401 KLF8O95600 359 aaPredicted RBP16.96■□□□□ 0.31
SCLT1-205ENST00000503401 RARAP10276 462 aa16.96■□□□□ 0.31
SCLT1-205ENST00000503401 EPHB2P29323 1055 aa16.96■□□□□ 0.31
SCLT1-205ENST00000503401 OR1E1P30953 314 aa16.96■□□□□ 0.31
SCLT1-205ENST00000503401 MAGEA9P43362 315 aa16.96■□□□□ 0.31
SCLT1-205ENST00000503401 VAV2P52735 878 aa16.96■□□□□ 0.31
SCLT1-205ENST00000503401 CCZ1BP86790 482 aa16.96■□□□□ 0.31
SCLT1-205ENST00000503401 CCZ1P86791 482 aaPredicted RBP16.96■□□□□ 0.31
SCLT1-205ENST00000503401 SATB1Q01826 763 aa16.96■□□□□ 0.31
SCLT1-205ENST00000503401 SEMA3BQ13214 749 aa16.96■□□□□ 0.31
SCLT1-205ENST00000503401 TCEAL1Q15170 157 aa16.96■□□□□ 0.31
SCLT1-205ENST00000503401 MBLAC2Q68D91 279 aa16.96■□□□□ 0.31
SCLT1-205ENST00000503401 KIAA0907Q7Z7F0 614 aaPredicted RBP16.96■□□□□ 0.31
SCLT1-205ENST00000503401 TXNDC5Q8NBS9 432 aaKnown RBP16.96■□□□□ 0.31
SCLT1-205ENST00000503401 EPAS1Q99814 870 aa16.96■□□□□ 0.31
SCLT1-205ENST00000503401 NCAPGQ9BPX3 1015 aa16.96■□□□□ 0.31
SCLT1-205ENST00000503401 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.96■□□□□ 0.31
SCLT1-205ENST00000503401 KLHL11Q9NVR0 708 aa16.96■□□□□ 0.31
SCLT1-205ENST00000503401 ZNF212Q9UDV6 495 aa16.96■□□□□ 0.31
SCLT1-205ENST00000503401 TRIM10Q9UDY6 481 aa16.96■□□□□ 0.31
SCLT1-205ENST00000503401 STARD13Q9Y3M8 1113 aa16.96■□□□□ 0.31
SCLT1-205ENST00000503401 WASH3PC4AMC7 463 aa16.96■□□□□ 0.3
SCLT1-205ENST00000503401 ARHGAP25P42331 645 aa16.96■□□□□ 0.3
SCLT1-205ENST00000503401 KRT83P78385 493 aa16.96■□□□□ 0.3
SCLT1-205ENST00000503401 MRPS21P82921 87 aaKnown RBP16.96■□□□□ 0.3
SCLT1-205ENST00000503401 ATP13A4Q4VNC1 1196 aa16.96■□□□□ 0.3
SCLT1-205ENST00000503401 PITRM1Q5JRX3 1037 aa16.96■□□□□ 0.3
SCLT1-205ENST00000503401 RNF219Q5W0B1 726 aaPredicted RBP16.96■□□□□ 0.3
SCLT1-205ENST00000503401 TSSK4Q6SA08 328 aa16.96■□□□□ 0.3
SCLT1-205ENST00000503401 NLRP14Q86W24 1093 aa16.96■□□□□ 0.3
SCLT1-205ENST00000503401 C1orf210Q8IVY1 113 aa16.96■□□□□ 0.3
SCLT1-205ENST00000503401 SPEM1Q8N4L4 309 aa16.96■□□□□ 0.3
SCLT1-205ENST00000503401 ZNF557Q8N988 423 aaPredicted RBP16.96■□□□□ 0.3
SCLT1-205ENST00000503401 CCDC112Q8NEF3 446 aa16.96■□□□□ 0.3
SCLT1-205ENST00000503401 WFIKKN2Q8TEU8 576 aa16.96■□□□□ 0.3
SCLT1-205ENST00000503401 CACNA2D2Q9NY47 1150 aa16.96■□□□□ 0.3
SCLT1-205ENST00000503401 DNAI1Q9UI46 699 aa16.96■□□□□ 0.3
SCLT1-205ENST00000503401 TBC1D30Q9Y2I9 924 aa16.96■□□□□ 0.3
SCLT1-205ENST00000503401 CHD5Q8TDI0 1954 aa16.95■□□□□ 0.3
SCLT1-205ENST00000503401 A0A0D9SEW6 157 aa16.95■□□□□ 0.3
SCLT1-205ENST00000503401 SGK1O00141 431 aa16.95■□□□□ 0.3
SCLT1-205ENST00000503401 ARHGAP6O43182 974 aa16.95■□□□□ 0.3
SCLT1-205ENST00000503401 BUB1BO60566 1050 aaPredicted RBP16.95■□□□□ 0.3
SCLT1-205ENST00000503401 ADAM23O75077 832 aa16.95■□□□□ 0.3
SCLT1-205ENST00000503401 RHOCP08134 193 aa16.95■□□□□ 0.3
SCLT1-205ENST00000503401 GOT1P17174 413 aa16.95■□□□□ 0.3
SCLT1-205ENST00000503401 MAN1A1P33908 653 aa16.95■□□□□ 0.3
SCLT1-205ENST00000503401 CTSOP43234 321 aaPredicted RBP16.95■□□□□ 0.3
SCLT1-205ENST00000503401 TPI1P60174 286 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms