RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 INTS6Q9UL03 887 aaKnown RBP13.2□□□□□ -0.3
HSPG2-213ENST00000498495 SNX10Q9Y5X0 201 aa13.2□□□□□ -0.3
HSPG2-213ENST00000498495 TCRBV5S1A1TA0A578 114 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 DRGXA6NNA5 263 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 I6L893 689 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-213ENST00000498495 ZNF217O75362 1048 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 GYPCP04921 128 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 HLA-EP13747 358 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 NDUFV2P19404 249 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 PRKCHP24723 683 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 ADRA1BP35368 520 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 NNMTP40261 264 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 ZNF143P52747 638 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-213ENST00000498495 RPL7AP62424 266 aaKnown RBP13.19□□□□□ -0.3
HSPG2-213ENST00000498495 ELF2Q15723 593 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 PTPRNQ16849 979 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 PLEKHG6Q3KR16 790 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 PLK5Q496M5 336 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 RAB6CQ53S08 254 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 RNF219Q5W0B1 726 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-213ENST00000498495 HGSNATQ68CP4 663 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 TMPRSS6Q8IU80 811 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 APCDD1Q8J025 514 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 GPR161Q8N6U8 529 aaKnown RBP13.19□□□□□ -0.3
HSPG2-213ENST00000498495 CENPIQ92674 756 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-213ENST00000498495 LOXL4Q96JB6 756 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 MRGPRX1Q96LB2 322 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 MCEEQ96PE7 176 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 RAB6CQ9H0N0 254 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 DUSP15Q9H1R2 295 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-213ENST00000498495 TMEM245Q9H330 911 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 PRDM16Q9HAZ2 1276 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 CD248Q9HCU0 757 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 ADAMTS1Q9UHI8 967 aa13.19□□□□□ -0.3
HSPG2-213ENST00000498495 E9PAM4 449 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 CNTN5O94779 1100 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 SRPRAP08240 638 aaKnown RBP13.18□□□□□ -0.3
HSPG2-213ENST00000498495 TPM1P09493 284 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 MZF1P28698 734 aaPredicted RBP13.18□□□□□ -0.3
HSPG2-213ENST00000498495 P2RY2P41231 377 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 IRAK1P51617 712 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 PLK1P53350 603 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 HDAC4P56524 1084 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 ECT2LQ008S8 904 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 SULT2A1Q06520 285 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 MAMLD1Q13495 774 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 TSR1Q2NL82 804 aaKnown RBP13.18□□□□□ -0.3
HSPG2-213ENST00000498495 MAP7D1Q3KQU3 841 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 ALFQ53S48 1182 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 PPP1R15BQ5SWA1 713 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 SPECC1LQ69YQ0 1117 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 SCYL2Q6P3W7 929 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 KIAA1324Q6UXG2 1013 aaKnown RBP13.18□□□□□ -0.3
HSPG2-213ENST00000498495 DNAAF5Q86Y56 855 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 FRMD1Q8N878 549 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 ZNF366Q8N895 744 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 PRCCQ92733 491 aaPredicted RBP13.18□□□□□ -0.3
HSPG2-213ENST00000498495 SIPA1Q96FS4 1042 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 ISCUQ9H1K1 167 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 OSBPL2Q9H1P3 480 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 SLC6A17Q9H1V8 727 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 MPP6Q9NZW5 540 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 CNOT8Q9UFF9 292 aaKnown RBP13.18□□□□□ -0.3
HSPG2-213ENST00000498495 OR12D3Q9UGF7 316 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 ERVW-1Q9UQF0 538 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 TBC1D30Q9Y2I9 924 aa13.18□□□□□ -0.3
HSPG2-213ENST00000498495 CCP110O43303 1012 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 PLEKP08567 350 aaPredicted RBP13.17□□□□□ -0.3
HSPG2-213ENST00000498495 MYBL1P10243 752 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 ACADMP11310 421 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 BCKDHBP21953 392 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 NUMBP49757 651 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 SPEM2Q0P670 501 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 CAMK2GQ13555 558 aaPredicted RBP13.17□□□□□ -0.3
HSPG2-213ENST00000498495 TRIM14Q14142 442 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 PLEKHA7Q6IQ23 1121 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 CXorf57Q6NSI4 855 aaKnown RBP13.17□□□□□ -0.3
HSPG2-213ENST00000498495 SLC36A4Q6YBV0 504 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 LPCAT2Q7L5N7 544 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 SLFN11Q7Z7L1 901 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 SETD3Q86TU7 594 aaPredicted RBP13.17□□□□□ -0.3
HSPG2-213ENST00000498495 METTL3Q86U44 580 aaKnown RBP13.17□□□□□ -0.3
HSPG2-213ENST00000498495 KIAA2013Q8IYS2 634 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 ZNF683Q8IZ20 524 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 KDM1BQ8NB78 822 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 OR8K1Q8NGG5 319 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 OR2T3Q8NH03 318 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 ZNF653Q96CK0 615 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 TRIM11Q96F44 468 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 RPL10LQ96L21 214 aaKnown RBP13.17□□□□□ -0.3
HSPG2-213ENST00000498495 FEM1AQ9BSK4 669 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 CNPY3Q9BT09 278 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 ZYG11BQ9C0D3 744 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 MKRN2Q9H000 416 aaKnown RBP13.17□□□□□ -0.3
HSPG2-213ENST00000498495 MUC3BQ9H195 1237 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 ARRDC1-AS1Q9H2J1 176 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 MRPL47Q9HD33 250 aaKnown RBP13.17□□□□□ -0.3
HSPG2-213ENST00000498495 PRSS16Q9NQE7 514 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 ITM2CQ9NQX7 267 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 MYO1AQ9UBC5 1043 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms