RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 FSCN3Q9NQT6 498 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 RRN3Q9NYV6 651 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 ERVW-1Q9UQF0 538 aa8.76□□□□□ -1.01
HMGXB4-207ENST00000498212 A0A1B0GTW7 788 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 A0A1B0GVM2 712 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 TCAF2A6NFQ2 919 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 METTL12A8MUP2 240 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 M0QYT0 321 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 ARHGAP33O14559 1287 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 OPHN1O60890 802 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 CEACAM1P13688 526 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 CSRP1P21291 193 aaKnown RBP8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 SCNN1AP37088 669 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 MATKP42679 507 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 GABRB2P47870 512 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 RNASE9P60153 205 aaKnown RBP8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 RPS14P62263 151 aaKnown RBP8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 ECT2LQ008S8 904 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 ZBTB16Q05516 673 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 KRT31Q15323 416 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 HNRNPA1L2Q32P51 320 aaKnown RBP8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 TTC31Q49AM3 519 aaPredicted RBP8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 FKBP15Q5T1M5 1219 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 FAM102AQ5T9C2 384 aaPredicted RBP8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 SH3PXD2AQ5TCZ1 1133 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 RNF219Q5W0B1 726 aaPredicted RBP8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 ZNF776Q68DI1 518 aaPredicted RBP8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 NOP9Q86U38 636 aaKnown RBP8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 ERICH1Q86X53 443 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 CIR1Q86X95 450 aaPredicted RBP8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 APCDD1Q8J025 514 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 CCAR2Q8N163 923 aaKnown RBP8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 HDDC3Q8N4P3 179 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 MINDY1Q8N5J2 469 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 KDM1BQ8NB78 822 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 MSANTD4Q8NCY6 345 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 EPS8L1Q8TE68 723 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 DNASE2BQ8WZ79 361 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 C18orf8Q96DM3 657 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 RPL10LQ96L21 214 aaKnown RBP8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 MRGPRX3Q96LB0 322 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 RPRD1AQ96P16 312 aaPredicted RBP8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 NPY6RQ99463 290 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 MIR1-1HGQ9H1L0 117 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 PCED1AQ9H1Q7 454 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 GANQ9H2C0 597 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 MTG2Q9H4K7 406 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 ANO10Q9NW15 660 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 FANCLQ9NW38 375 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 STAP1Q9ULZ2 295 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 ITIH6Q6UXX5 1313 aa8.75□□□□□ -1.01
HMGXB4-207ENST00000498212 CHD5Q8TDI0 1954 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 EDDM13A0A1B0GTR0 161 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 FAM170AA1A519 330 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 TARSL2A2RTX5 802 aaKnown RBP8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 GIPC1O14908 333 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 RNASEH1O60930 286 aaKnown RBP8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 SIN3BO75182 1162 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 GFPT2O94808 682 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 LSM8O95777 96 aaKnown RBP8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 MBD3O95983 291 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 F9P00740 461 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 MMEP08473 750 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 PDGFRAP16234 1089 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 PMLP29590 882 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 ACSL1P33121 698 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 GGCXP38435 758 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 NNMTP40261 264 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 CTSOP43234 321 aaPredicted RBP8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 KLK7P49862 253 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 SULT1E1P49888 294 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 OXCT1P55809 520 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 POLR2FP61218 127 aaKnown RBP8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 NOMO3P69849 1222 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 MYL5Q02045 173 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 CENPCQ03188 943 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 DEUP1Q05D60 604 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 SULT2A1Q06520 285 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 AUHQ13825 339 aaKnown RBP8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 ARID5BQ14865 1188 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 STX1AQ16623 288 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 BRMS1LQ5PSV4 323 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 OTUD1Q5VV17 481 aaPredicted RBP8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 FBXL22Q6P050 247 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 SND1Q7KZF4 910 aaKnown RBP eCLIP8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 ZNF677Q86XU0 584 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 XYLT1Q86Y38 959 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 DHX40Q8IX18 779 aaKnown RBP8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 ZCCHC9Q8N567 271 aaKnown RBP8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 ANKRD20A12PQ8NF67 263 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 SNX19Q92543 992 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 IGSF8Q969P0 613 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 PGAP3Q96FM1 320 aaPredicted RBP8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 CNTNAP3BQ96NU0 1288 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 PPP1R9BQ96SB3 815 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 ADAM33Q9BZ11 813 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 CNTNAP3Q9BZ76 1288 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 BTBD1Q9H0C5 482 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 TKTL2Q9H0I9 626 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms