RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 CISD3P0C7P0 127 aa16.3■□□□□ 0.2
PMF1-205ENST00000497069 OR1E1P30953 314 aa16.3■□□□□ 0.2
PMF1-205ENST00000497069 IRAK1P51617 712 aa16.3■□□□□ 0.2
PMF1-205ENST00000497069 CDH6P55285 790 aa16.3■□□□□ 0.2
PMF1-205ENST00000497069 SEMA3BQ13214 749 aa16.3■□□□□ 0.2
PMF1-205ENST00000497069 ALFQ53S48 1182 aa16.3■□□□□ 0.2
PMF1-205ENST00000497069 C6orf118Q5T5N4 469 aa16.3■□□□□ 0.2
PMF1-205ENST00000497069 RNF43Q68DV7 783 aa16.3■□□□□ 0.2
PMF1-205ENST00000497069 ANKS1BQ7Z6G8 1248 aa16.3■□□□□ 0.2
PMF1-205ENST00000497069 TFAP2DQ7Z6R9 452 aa16.3■□□□□ 0.2
PMF1-205ENST00000497069 CCDC26Q8TAB7 109 aa16.3■□□□□ 0.2
PMF1-205ENST00000497069 WFIKKN2Q8TEU8 576 aa16.3■□□□□ 0.2
PMF1-205ENST00000497069 CALN1Q9BXU9 219 aa16.3■□□□□ 0.2
PMF1-205ENST00000497069 FOXQ1Q9C009 403 aa16.3■□□□□ 0.2
PMF1-205ENST00000497069 EPHX3Q9H6B9 360 aa16.3■□□□□ 0.2
PMF1-205ENST00000497069 PCDH18Q9HCL0 1135 aa16.3■□□□□ 0.2
PMF1-205ENST00000497069 FBRSL1Q9HCM7 1045 aaKnown RBP16.3■□□□□ 0.2
PMF1-205ENST00000497069 GGA2Q9UJY4 613 aa16.3■□□□□ 0.2
PMF1-205ENST00000497069 TRIM24O15164 1050 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 EGFP01133 1207 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 KRT1P04264 644 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 RHOCP08134 193 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 PABPC1P11940 636 aaKnown RBP16.29■□□□□ 0.2
PMF1-205ENST00000497069 GOT1P17174 413 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 TARSP26639 723 aaKnown RBP16.29■□□□□ 0.2
PMF1-205ENST00000497069 HLA-FP30511 346 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 HOXC13P31276 330 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 TNFRSF4P43489 277 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 HCAR3P49019 387 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 SLC12A1Q13621 1099 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 PDK2Q15119 407 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 FBXO43Q4G163 708 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 ATP13A4Q4VNC1 1196 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 DGKKQ5KSL6 1271 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 FSTL4Q6MZW2 842 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 RFX8Q6ZV50 586 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 PEX26Q7Z412 305 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 AHI1Q8N157 1196 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 PJA1Q8NG27 643 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 WFDC5Q8TCV5 224 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 PBXIP1Q96AQ6 731 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 OSBPL6Q9BZF3 934 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 MUC3BQ9H195 1237 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 KLHL11Q9NVR0 708 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 TMEM248Q9NWD8 314 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 RCOR3Q9P2K3 495 aaPredicted RBP16.29■□□□□ 0.2
PMF1-205ENST00000497069 AMFRQ9UKV5 643 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 SIT1Q9Y3P8 196 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 COL4A3Q01955 1670 aa16.29■□□□□ 0.2
PMF1-205ENST00000497069 LRRD1A4D1F6 860 aa16.28■□□□□ 0.2
PMF1-205ENST00000497069 SHISA7A6NL88 538 aa16.28■□□□□ 0.2
PMF1-205ENST00000497069 CD70P32970 193 aa16.28■□□□□ 0.2
PMF1-205ENST00000497069 MAPKAPK2P49137 400 aa16.28■□□□□ 0.2
PMF1-205ENST00000497069 LMAN2Q12907 356 aa16.28■□□□□ 0.2
PMF1-205ENST00000497069 EIF4HQ15056 248 aaKnown RBP16.28■□□□□ 0.2
PMF1-205ENST00000497069 E2F5Q15329 346 aa16.28■□□□□ 0.2
PMF1-205ENST00000497069 GEN1Q17RS7 908 aa16.28■□□□□ 0.2
PMF1-205ENST00000497069 FSCBQ5H9T9 825 aa16.28■□□□□ 0.2
PMF1-205ENST00000497069 ASTLQ6HA08 431 aaPredicted RBP16.28■□□□□ 0.2
PMF1-205ENST00000497069 SETD3Q86TU7 594 aaPredicted RBP16.28■□□□□ 0.2
PMF1-205ENST00000497069 PHTF2Q8N3S3 785 aa16.28■□□□□ 0.2
PMF1-205ENST00000497069 SYNPOQ8N3V7 929 aa16.28■□□□□ 0.2
PMF1-205ENST00000497069 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.28■□□□□ 0.2
PMF1-205ENST00000497069 RTL3Q8N8U3 475 aaKnown RBP16.28■□□□□ 0.2
PMF1-205ENST00000497069 LRRC57Q8N9N7 239 aa16.28■□□□□ 0.2
PMF1-205ENST00000497069 UCMAQ8WVF2 138 aa16.28■□□□□ 0.2
PMF1-205ENST00000497069 CIPCQ9C0C6 399 aa16.28■□□□□ 0.2
PMF1-205ENST00000497069 LMAN1LQ9HAT1 526 aa16.28■□□□□ 0.2
PMF1-205ENST00000497069 CWC15Q9P013 229 aaKnown RBP16.28■□□□□ 0.2
PMF1-205ENST00000497069 DNAI1Q9UI46 699 aa16.28■□□□□ 0.2
PMF1-205ENST00000497069 TBC1D30Q9Y2I9 924 aa16.28■□□□□ 0.2
PMF1-205ENST00000497069 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.28■□□□□ 0.2
PMF1-205ENST00000497069 CAPN6Q9Y6Q1 641 aa16.28■□□□□ 0.2
PMF1-205ENST00000497069 A0A0A0MRY4 1105 aa16.27■□□□□ 0.2
PMF1-205ENST00000497069 TIMM44O43615 452 aa16.27■□□□□ 0.2
PMF1-205ENST00000497069 FTCDO95954 541 aa16.27■□□□□ 0.2
PMF1-205ENST00000497069 PDGFBP01127 241 aaPredicted RBP16.27■□□□□ 0.2
PMF1-205ENST00000497069 POLR2EP19388 210 aaKnown RBP16.27■□□□□ 0.2
PMF1-205ENST00000497069 KDELR1P24390 212 aa16.27■□□□□ 0.2
PMF1-205ENST00000497069 CSKP41240 450 aa16.27■□□□□ 0.2
PMF1-205ENST00000497069 SEC13P55735 322 aa16.27■□□□□ 0.2
PMF1-205ENST00000497069 MESP2Q0VG99 397 aa16.27■□□□□ 0.2
PMF1-205ENST00000497069 CCINQ13939 588 aa16.27■□□□□ 0.2
PMF1-205ENST00000497069 DMC1Q14565 340 aa16.27■□□□□ 0.2
PMF1-205ENST00000497069 RNF219Q5W0B1 726 aaPredicted RBP16.27■□□□□ 0.2
PMF1-205ENST00000497069 CXorf57Q6NSI4 855 aaKnown RBP16.27■□□□□ 0.2
PMF1-205ENST00000497069 NLRP14Q86W24 1093 aa16.27■□□□□ 0.2
PMF1-205ENST00000497069 UBL4BQ8N7F7 174 aa16.27■□□□□ 0.2
PMF1-205ENST00000497069 TRIM58Q8NG06 486 aa16.27■□□□□ 0.2
PMF1-205ENST00000497069 UBE2Q2Q8WVN8 375 aa16.27■□□□□ 0.2
PMF1-205ENST00000497069 CSPG4P5Q96PW8 444 aa16.27■□□□□ 0.2
PMF1-205ENST00000497069 ZNF670Q9BS34 389 aa16.27■□□□□ 0.2
PMF1-205ENST00000497069 TRMT1Q9NXH9 659 aaKnown RBP16.27■□□□□ 0.2
PMF1-205ENST00000497069 PYCARDQ9ULZ3 195 aa16.27■□□□□ 0.2
PMF1-205ENST00000497069 NEU3Q9UQ49 428 aa16.27■□□□□ 0.2
PMF1-205ENST00000497069 MTF2Q9Y483 593 aaPredicted RBP16.27■□□□□ 0.2
PMF1-205ENST00000497069 ILVBLA1L0T0 632 aa16.26■□□□□ 0.19
PMF1-205ENST00000497069 CCDC66A2RUB6 948 aa16.26■□□□□ 0.19
PMF1-205ENST00000497069 GOLGA6L9A6NEM1 432 aa16.26■□□□□ 0.19
PMF1-205ENST00000497069 WASH4PA8MWX3 477 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms