RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.74□□□□□ -0.21
PHGDH-207ENST00000496756 HSFY1Q96LI6 401 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 SLC22A12Q96S37 553 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 GTPBP2Q9BX10 602 aaKnown RBP13.74□□□□□ -0.21
PHGDH-207ENST00000496756 PARD6BQ9BYG5 372 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 LINC00597Q9H2U6 94 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 HOMER3Q9NSC5 361 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.74□□□□□ -0.21
PHGDH-207ENST00000496756 DDX56Q9NY93 547 aaKnown RBP13.74□□□□□ -0.21
PHGDH-207ENST00000496756 HMGXB4Q9UGU5 601 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 L1RE1Q9UN81 338 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 ARHGAP26Q9UNA1 814 aa13.74□□□□□ -0.21
PHGDH-207ENST00000496756 ACACAQ13085 2346 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 KRIT1O00522 736 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 GABRDO14764 452 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 CALCAP01258 141 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 PFKLP17858 780 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 HDCP19113 662 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 GPR15P49685 360 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 COPS2P61201 443 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 SCAPQ12770 1279 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 DDR2Q16832 855 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 HADHQ16836 314 aaKnown RBP13.73□□□□□ -0.21
PHGDH-207ENST00000496756 PTPN20Q4JDL3 420 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 PKDCCQ504Y2 493 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 ODF2Q5BJF6 829 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 ARCQ7LC44 396 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 POLNQ7Z5Q5 900 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 ACOT1Q86TX2 421 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 KIAA1958Q8N8K9 716 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 ARL14EPQ8N8R7 260 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-207ENST00000496756 EIF1ADQ8N9N8 165 aaKnown RBP13.73□□□□□ -0.21
PHGDH-207ENST00000496756 TXNDC5Q8NBS9 432 aaKnown RBP13.73□□□□□ -0.21
PHGDH-207ENST00000496756 NOA1Q8NC60 698 aaKnown RBP13.73□□□□□ -0.21
PHGDH-207ENST00000496756 KBTBD7Q8WVZ9 684 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 RBM41Q96IZ5 413 aaKnown RBP13.73□□□□□ -0.21
PHGDH-207ENST00000496756 HNRNPABQ99729 332 aaKnown RBP13.73□□□□□ -0.21
PHGDH-207ENST00000496756 ACBD6Q9BR61 282 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 GOLPH3Q9H4A6 298 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 CCDC86Q9H6F5 360 aaKnown RBP13.73□□□□□ -0.21
PHGDH-207ENST00000496756 ANKZF1Q9H8Y5 726 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 ARFGAP3Q9NP61 516 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 MBD1Q9UIS9 605 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-207ENST00000496756 CDH9Q9ULB4 789 aa13.73□□□□□ -0.21
PHGDH-207ENST00000496756 PLXND1Q9Y4D7 1925 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 SMG1Q96Q15 3661 aaKnown RBP13.72□□□□□ -0.21
PHGDH-207ENST00000496756 EIF4E1BA6NMX2 242 aaKnown RBP13.72□□□□□ -0.21
PHGDH-207ENST00000496756 KLF8O95600 359 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-207ENST00000496756 FGGP02679 453 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 ERBB2P04626 1255 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 SYPP08247 313 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 KRT7P08729 469 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 RHOXF2BP0C7M4 288 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 ITPKAP23677 461 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 TNFRSF8P28908 595 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 EIF2DP41214 584 aaKnown RBP13.72□□□□□ -0.21
PHGDH-207ENST00000496756 C2orf54Q08AI8 447 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 SLC14A1Q13336 389 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 MAPRE1Q15691 268 aaKnown RBP13.72□□□□□ -0.21
PHGDH-207ENST00000496756 COL28A1Q2UY09 1125 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 MAP7D1Q3KQU3 841 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 SDHAF4Q5VUM1 108 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 SLC36A4Q6YBV0 504 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 TMEM110Q86TL2 294 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 XYLT1Q86Y38 959 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 IFT20Q8IY31 132 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 KATNAL2Q8IYT4 538 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 PGBD3Q8N328 593 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 ALLCQ8N6M5 410 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 IL17RCQ8NAC3 791 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 B3GALNT2Q8NCR0 500 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 STKLD1Q8NE28 680 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 EXD1Q8NHP7 514 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 SLC35F5Q8WV83 523 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 HMGB4Q8WW32 186 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 MS4A14Q96JA4 679 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 MCEEQ96PE7 176 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 PNKPQ96T60 521 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 RHOXF2Q9BQY4 288 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 SLC4A5Q9BY07 1137 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 CAPN10Q9HC96 672 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 TMLHEQ9NVH6 421 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 ASNSD1Q9NWL6 643 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 FEZ2Q9UHY8 353 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-207ENST00000496756 PCDHB9Q9Y5E1 797 aa13.72□□□□□ -0.21
PHGDH-207ENST00000496756 ATXN2Q99700 1313 aaKnown RBP13.71□□□□□ -0.21
PHGDH-207ENST00000496756 HELZ2Q9BYK8 2649 aaKnown RBP13.71□□□□□ -0.21
PHGDH-207ENST00000496756 ARHGAP33O14559 1287 aa13.71□□□□□ -0.21
PHGDH-207ENST00000496756 SLC9A3R1O14745 358 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-207ENST00000496756 RNF8O76064 485 aa13.71□□□□□ -0.21
PHGDH-207ENST00000496756 ZRANB2O95218 330 aaKnown RBP eCLIP13.71□□□□□ -0.21
PHGDH-207ENST00000496756 APODP05090 189 aa13.71□□□□□ -0.21
PHGDH-207ENST00000496756 HNRNPLP14866 589 aaKnown RBP eCLIP13.71□□□□□ -0.21
PHGDH-207ENST00000496756 PTPN1P18031 435 aaKnown RBP13.71□□□□□ -0.21
PHGDH-207ENST00000496756 CYP2F1P24903 491 aa13.71□□□□□ -0.21
PHGDH-207ENST00000496756 CHRNA3P32297 505 aa13.71□□□□□ -0.21
PHGDH-207ENST00000496756 RPL34P49207 117 aaKnown RBP13.71□□□□□ -0.21
PHGDH-207ENST00000496756 FAM193AP78312 1265 aa13.71□□□□□ -0.21
PHGDH-207ENST00000496756 DHX34Q14147 1143 aaKnown RBP13.71□□□□□ -0.21
PHGDH-207ENST00000496756 NAA30Q147X3 362 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms