RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 LRMDAQ9H2I8 198 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 KANSL3Q9P2N6 904 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 SLC17A6Q9P2U8 582 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 ZFP69BQ9UJL9 534 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 TRHDEQ9UKU6 1024 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 ABT1Q9ULW3 272 aaKnown RBP13.38□□□□□ -0.27
GARNL3-220ENST00000496711 TRIM33Q9UPN9 1127 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 SQORQ9Y6N5 450 aa13.38□□□□□ -0.27
GARNL3-220ENST00000496711 A0A0G2JND7 137 aa13.37□□□□□ -0.27
GARNL3-220ENST00000496711 CHUKO15111 745 aa13.37□□□□□ -0.27
GARNL3-220ENST00000496711 ITGB1P05556 798 aa13.37□□□□□ -0.27
GARNL3-220ENST00000496711 KRT16P08779 473 aa13.37□□□□□ -0.27
GARNL3-220ENST00000496711 TARSP26639 723 aaKnown RBP13.37□□□□□ -0.27
GARNL3-220ENST00000496711 ZBTB17Q13105 803 aa13.37□□□□□ -0.27
GARNL3-220ENST00000496711 ATG16L1Q676U5 607 aa13.37□□□□□ -0.27
GARNL3-220ENST00000496711 C4orf50Q6ZRC1 276 aa13.37□□□□□ -0.27
GARNL3-220ENST00000496711 LRRTM3Q86VH5 581 aa13.37□□□□□ -0.27
GARNL3-220ENST00000496711 SPATA2LQ8IUW3 424 aaPredicted RBP13.37□□□□□ -0.27
GARNL3-220ENST00000496711 OR52K1Q8NGK4 314 aa13.37□□□□□ -0.27
GARNL3-220ENST00000496711 CERS2Q96G23 380 aa13.37□□□□□ -0.27
GARNL3-220ENST00000496711 AGAP3Q96P47 875 aa13.37□□□□□ -0.27
GARNL3-220ENST00000496711 LRRC40Q9H9A6 602 aa13.37□□□□□ -0.27
GARNL3-220ENST00000496711 SIRPGQ9P1W8 387 aa13.37□□□□□ -0.27
GARNL3-220ENST00000496711 ZFATQ9P243 1243 aa13.37□□□□□ -0.27
GARNL3-220ENST00000496711 PCDHB8Q9UN66 801 aa13.37□□□□□ -0.27
GARNL3-220ENST00000496711 MYLKQ15746 1914 aa13.37□□□□□ -0.27
GARNL3-220ENST00000496711 ZBTB24O43167 697 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-220ENST00000496711 IRAK2O43187 625 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 ALDH1A1P00352 501 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 ELNP15502 786 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 NFKB1P19838 968 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 ARFIP2P53365 341 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 SLC5A3P53794 718 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 COG7P83436 770 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 TAF1BQ53T94 588 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-220ENST00000496711 ICE2Q659A1 982 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 KCTD11Q693B1 232 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 STKLD1Q8NE28 680 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 SCAMP5Q8TAC9 235 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 INPP5DQ92835 1189 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 E2F7Q96AV8 911 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 C7orf26Q96N11 449 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 RAB3IPQ96QF0 476 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-220ENST00000496711 MECRQ9BV79 373 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 OSBPL2Q9H1P3 480 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 NOD2Q9HC29 1040 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 CASS4Q9NQ75 786 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 ABCC13Q9NSE7 274 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 ARHGEF38Q9NXL2 777 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 VANGL2Q9ULK5 521 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 MTO1Q9Y2Z2 717 aaKnown RBP13.36□□□□□ -0.27
GARNL3-220ENST00000496711 RPS6KL1Q9Y6S9 549 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 VWA8A3KMH1 1905 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 TMEM88BA6NKF7 163 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 F8W810 466 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 TPP1O14773 563 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 BIRC5O15392 142 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 GLRA3O75311 464 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 CABYRO75952 493 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 ALDOAP04075 364 aaKnown RBP13.36□□□□□ -0.27
GARNL3-220ENST00000496711 CD68P34810 354 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-220ENST00000496711 TMPRSS15P98073 1019 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 YWHAHQ04917 246 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-220ENST00000496711 ZNF33AQ06730 810 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 OLIG2Q13516 323 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 EIF4EBP2Q13542 120 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-220ENST00000496711 DBN1Q16643 649 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 TEX44Q53QW1 395 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 BRMS1LQ5PSV4 323 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 STXBP5Q5T5C0 1151 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 BTBD8Q5XKL5 378 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 KYAT3Q6YP21 454 aaKnown RBP13.36□□□□□ -0.27
GARNL3-220ENST00000496711 CCDC91Q7Z6B0 441 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 CLNKQ7Z7G1 428 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 MTDHQ86UE4 582 aaKnown RBP13.36□□□□□ -0.27
GARNL3-220ENST00000496711 NUDCD3Q8IVD9 361 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 MAGEC3Q8TD91 643 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 ZNF669Q96BR6 464 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-220ENST00000496711 MLPHQ9BV36 600 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-220ENST00000496711 TMEM120AQ9BXJ8 343 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 SMOC2Q9H3U7 446 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 CD248Q9HCU0 757 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 BFARQ9NZS9 450 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 TXNDC16Q9P2K2 825 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 BAIAP2L1Q9UHR4 511 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 HAO1Q9UJM8 370 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 NEU3Q9UQ49 428 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 PSAT1Q9Y617 370 aa13.36□□□□□ -0.27
GARNL3-220ENST00000496711 MIA3Q5JRA6 1907 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 CCDC195A0A1B0GUA6 201 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 ARHGAP42A6NI28 874 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 USP12O75317 370 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 USP1O94782 785 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 BPGMP07738 259 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 ITGA2BP08514 1039 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 DLDP09622 509 aaKnown RBP13.35□□□□□ -0.27
GARNL3-220ENST00000496711 HTR7P34969 479 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 GP5P40197 560 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 BST1Q10588 318 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 FRG1Q14331 258 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms