RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 PDGFRAP16234 1089 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 ABCB4P21439 1286 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 AFF3P51826 1226 aaKnown RBP13.38□□□□□ -0.27
FN1-226ENST00000496542 ECT2LQ008S8 904 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 PTK2Q05397 1052 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 TEAD4Q15561 434 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 TRIP6Q15654 476 aaKnown RBP13.38□□□□□ -0.27
FN1-226ENST00000496542 MAN2A1Q16706 1144 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 HLA-BQ31612 363 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 OR6B2Q6IFH4 312 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 LAYNQ6UX15 382 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 FAM183BPQ6ZVS7 135 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 APCDD1Q8J025 514 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 CHCHD4Q8N4Q1 142 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 WDTC1Q8N5D0 677 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 SETD7Q8WTS6 366 aaKnown RBP13.38□□□□□ -0.27
FN1-226ENST00000496542 BIRC7Q96CA5 298 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 NOX5Q96PH1 765 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 SLC2A13Q96QE2 648 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 CLSTN2Q9H4D0 955 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 SYNCQ9H7C4 482 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 SGK2Q9HBY8 427 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 TM9SF3Q9HD45 589 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 SIX2Q9NPC8 291 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.38□□□□□ -0.27
FN1-226ENST00000496542 FBXL12Q9NXK8 326 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 CHMP5Q9NZZ3 219 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 KIAA1522Q9P206 1035 aaPredicted RBP13.38□□□□□ -0.27
FN1-226ENST00000496542 DNAJC12Q9UKB3 198 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 PCDHGC3Q9UN70 934 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 NCKAP1Q9Y2A7 1128 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 NEUROG3Q9Y4Z2 214 aa13.38□□□□□ -0.27
FN1-226ENST00000496542 SPEGQ15772 3267 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 CACNA1GO43497 2377 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 EDDM13A0A1B0GTR0 161 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 A0A1W2PP55 124 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 MID1O15344 667 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 TRIM16O95361 564 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 ERBB2P04626 1255 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 GLI1P08151 1106 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 SRPRAP08240 638 aaKnown RBP13.37□□□□□ -0.27
FN1-226ENST00000496542 FTH1P19P0C7X4 201 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 SLC2A3P11169 496 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 CD27P26842 260 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 CCR1P32246 355 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 KRT9P35527 623 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 PSMD8P48556 350 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 STK19P49842 368 aaPredicted RBP13.37□□□□□ -0.27
FN1-226ENST00000496542 CENPCQ03188 943 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 CST6Q15828 149 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 ZNF423Q2M1K9 1284 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 KIF19Q2TAC6 998 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 DPCR1Q3MIW9 517 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 HSP90AA4PQ58FG1 418 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 EFHC1Q5JVL4 640 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 RABGAP1LQ5R372 815 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 C9orf64Q5T6V5 341 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 OLFML1Q6UWY5 402 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 C11orf57Q6ZUT1 292 aaPredicted RBP13.37□□□□□ -0.27
FN1-226ENST00000496542 USP30Q70CQ3 517 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 SLC47A2Q86VL8 602 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 MMAAQ8IVH4 418 aaKnown RBP13.37□□□□□ -0.27
FN1-226ENST00000496542 FAM114A1Q8IWE2 563 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 KDM1BQ8NB78 822 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 GATA6Q92908 595 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 RPL10LQ96L21 214 aaKnown RBP13.37□□□□□ -0.27
FN1-226ENST00000496542 PRMT1Q99873 361 aaKnown RBP13.37□□□□□ -0.27
FN1-226ENST00000496542 TMEM121BQ9BXQ6 578 aaPredicted RBP13.37□□□□□ -0.27
FN1-226ENST00000496542 PLCB1Q9NQ66 1216 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 TM7SF3Q9NS93 570 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 ASNSD1Q9NWL6 643 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 SERGEFQ9UGK8 458 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 SLCO3A1Q9UIG8 710 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 ZMIZ1Q9ULJ6 1067 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 SCML1Q9UN30 329 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 PLXNA2O75051 1894 aa13.37□□□□□ -0.27
FN1-226ENST00000496542 APC2O95996 2303 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 A0A1B0GVM2 712 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 FAM170AA1A519 330 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 TARSL2A2RTX5 802 aaKnown RBP13.36□□□□□ -0.27
FN1-226ENST00000496542 TCAF2A6NFQ2 919 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 FOXN3O00409 490 aaPredicted RBP13.36□□□□□ -0.27
FN1-226ENST00000496542 PES1O00541 588 aaKnown RBP13.36□□□□□ -0.27
FN1-226ENST00000496542 DAB1O75553 588 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 RNASEH2AO75792 299 aaKnown RBP13.36□□□□□ -0.27
FN1-226ENST00000496542 ZNF883P0CG24 379 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 PRKCSHP14314 528 aaPredicted RBP13.36□□□□□ -0.27
FN1-226ENST00000496542 MZF1P28698 734 aaPredicted RBP13.36□□□□□ -0.27
FN1-226ENST00000496542 CLCN1P35523 988 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 GGCXP38435 758 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 GRIA4P48058 902 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 SNX16P57768 344 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 SFSWAPQ12872 951 aaKnown RBP13.36□□□□□ -0.27
FN1-226ENST00000496542 NME3Q13232 169 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 EIF4EBP2Q13542 120 aaPredicted RBP13.36□□□□□ -0.27
FN1-226ENST00000496542 RAPGEF1Q13905 1077 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 ARID5BQ14865 1188 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 PTPN20Q4JDL3 420 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 TTC39BQ5VTQ0 682 aaPredicted RBP13.36□□□□□ -0.27
FN1-226ENST00000496542 KIAA0895LQ68EN5 471 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms