RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 KDM1BQ8NB78 822 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 ZNF397Q8NF99 534 aaPredicted RBP14.75□□□□□ -0.05
VTI1A-209ENST00000496445 GPT2Q8TD30 523 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 NOX5Q96PH1 765 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 MIR1-1HGQ9H1L0 117 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 SUN2Q9UH99 717 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 EIF2B4Q9UI10 523 aaKnown RBP14.75□□□□□ -0.05
VTI1A-209ENST00000496445 ERVW-1Q9UQF0 538 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 FREM2Q5SZK8 3169 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 IGF2RP11717 2491 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 FAM170AA1A519 330 aa14.74□□□□□ -0.05
VTI1A-209ENST00000496445 TTC34A8MYJ7 566 aa14.74□□□□□ -0.05
VTI1A-209ENST00000496445 TOP3BO95985 862 aaKnown RBP14.74□□□□□ -0.05
VTI1A-209ENST00000496445 SRPRAP08240 638 aaKnown RBP14.74□□□□□ -0.05
VTI1A-209ENST00000496445 CYP11B1P15538 503 aa14.74□□□□□ -0.05
VTI1A-209ENST00000496445 TFE3P19532 575 aaPredicted RBP14.74□□□□□ -0.05
VTI1A-209ENST00000496445 EEF1GP26641 437 aaKnown RBP14.74□□□□□ -0.05
VTI1A-209ENST00000496445 CCR1P32246 355 aa14.74□□□□□ -0.05
VTI1A-209ENST00000496445 GGCXP38435 758 aa14.74□□□□□ -0.05
VTI1A-209ENST00000496445 ANP32AP39687 249 aaKnown RBP14.74□□□□□ -0.05
VTI1A-209ENST00000496445 STK19P49842 368 aaPredicted RBP14.74□□□□□ -0.05
VTI1A-209ENST00000496445 ST8SIA6P61647 398 aa14.74□□□□□ -0.05
VTI1A-209ENST00000496445 ZBTB16Q05516 673 aa14.74□□□□□ -0.05
VTI1A-209ENST00000496445 FOXC1Q12948 553 aa14.74□□□□□ -0.05
VTI1A-209ENST00000496445 CXorf57Q6NSI4 855 aaKnown RBP14.74□□□□□ -0.05
VTI1A-209ENST00000496445 FBXL22Q6P050 247 aa14.74□□□□□ -0.05
VTI1A-209ENST00000496445 RBM43Q6ZSC3 357 aaKnown RBP14.74□□□□□ -0.05
VTI1A-209ENST00000496445 DHX40Q8IX18 779 aaKnown RBP14.74□□□□□ -0.05
VTI1A-209ENST00000496445 CCAR2Q8N163 923 aaKnown RBP14.74□□□□□ -0.05
VTI1A-209ENST00000496445 HDDC3Q8N4P3 179 aa14.74□□□□□ -0.05
VTI1A-209ENST00000496445 IGSF8Q969P0 613 aa14.74□□□□□ -0.05
VTI1A-209ENST00000496445 PCED1AQ9H1Q7 454 aa14.74□□□□□ -0.05
VTI1A-209ENST00000496445 PABPC3Q9H361 631 aaKnown RBP14.74□□□□□ -0.05
VTI1A-209ENST00000496445 ANLNQ9NQW6 1124 aa14.74□□□□□ -0.05
VTI1A-209ENST00000496445 TAB2Q9NYJ8 693 aa14.74□□□□□ -0.05
VTI1A-209ENST00000496445 KIAA1522Q9P206 1035 aaPredicted RBP14.74□□□□□ -0.05
VTI1A-209ENST00000496445 SERGEFQ9UGK8 458 aa14.74□□□□□ -0.05
VTI1A-209ENST00000496445 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.74□□□□□ -0.05
VTI1A-209ENST00000496445 HS3ST4Q9Y661 456 aa14.74□□□□□ -0.05
VTI1A-209ENST00000496445 DOCK4Q8N1I0 1966 aa14.74□□□□□ -0.05
VTI1A-209ENST00000496445 A0A1B0GVM2 712 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 SPAARA0A1B0GVQ0 90 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 TCAF2A6NFQ2 919 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 F8VZ95 297 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 I6L893 689 aaPredicted RBP14.73□□□□□ -0.05
VTI1A-209ENST00000496445 PES1O00541 588 aaKnown RBP14.73□□□□□ -0.05
VTI1A-209ENST00000496445 BCAT2O15382 392 aaPredicted RBP14.73□□□□□ -0.05
VTI1A-209ENST00000496445 SEMA4FO95754 770 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 DNTTP04053 509 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 SLC2A3P11169 496 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 UCHL3P15374 230 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 PDGFRAP16234 1089 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 ABCB4P21439 1286 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 MZF1P28698 734 aaPredicted RBP14.73□□□□□ -0.05
VTI1A-209ENST00000496445 GABRB2P47870 512 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 FAM193AP78312 1265 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 ECT2LQ008S8 904 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 NME3Q13232 169 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 TTC31Q49AM3 519 aaPredicted RBP14.73□□□□□ -0.05
VTI1A-209ENST00000496445 CT47A1Q5JQC4 288 aaPredicted RBP14.73□□□□□ -0.05
VTI1A-209ENST00000496445 C9orf64Q5T6V5 341 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 TTC39BQ5VTQ0 682 aaPredicted RBP14.73□□□□□ -0.05
VTI1A-209ENST00000496445 CDKAL1Q5VV42 579 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 TAF3Q5VWG9 929 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 C14orf80Q86SX3 495 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 NOP9Q86U38 636 aaKnown RBP14.73□□□□□ -0.05
VTI1A-209ENST00000496445 CCDC117Q8IWD4 279 aaPredicted RBP14.73□□□□□ -0.05
VTI1A-209ENST00000496445 OR52K2Q8NGK3 314 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 SNX19Q92543 992 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 RPL10LQ96L21 214 aaKnown RBP14.73□□□□□ -0.05
VTI1A-209ENST00000496445 ORAI3Q9BRQ5 295 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 BTBD1Q9H0C5 482 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 GANQ9H2C0 597 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 SLC32A1Q9H598 525 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 SYNCQ9H7C4 482 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 PIGVQ9NUD9 493 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 SLCO3A1Q9UIG8 710 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 CEP83Q9Y592 693 aa14.73□□□□□ -0.05
VTI1A-209ENST00000496445 EDDM13A0A1B0GTR0 161 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 MID1O15344 667 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 MOCS3O95396 460 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 SPINK2P20155 84 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 NOS2P35228 1153 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 MATKP42679 507 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 KLK7P49862 253 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 BPIFB4P59827 614 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 SLC12A1Q13621 1099 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 AUHQ13825 339 aaKnown RBP14.72□□□□□ -0.05
VTI1A-209ENST00000496445 CST6Q15828 149 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 C2CD6Q53TS8 623 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 RABGAP1LQ5R372 815 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 XYLT1Q86Y38 959 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 ZDHHC17Q8IUH5 632 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 TMEM35BQ8NCS4 154 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 ENOX1Q8TC92 643 aaKnown RBP14.72□□□□□ -0.05
VTI1A-209ENST00000496445 PTPRN2Q92932 1015 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 RNF34Q969K3 372 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 CAMK1GQ96NX5 476 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 RPRD1AQ96P16 312 aaPredicted RBP14.72□□□□□ -0.05
VTI1A-209ENST00000496445 NPY6RQ99463 290 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms