RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 TMEM179Q6ZVK1 233 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 MFSD2AQ8NA29 543 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 RP9Q8TA86 221 aaKnown RBP9.27□□□□□ -0.93
HPS4-217ENST00000496385 SLC35B2Q8TB61 432 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 BRI3BPQ8WY22 251 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 TRIB2Q92519 343 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 MS4A4AQ96JQ5 239 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 CNDP1Q96KN2 507 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 MECRQ9BV79 373 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 C20orf27Q9GZN8 174 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 SMARCAD1Q9H4L7 1026 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 KCND2Q9NZV8 630 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 CORINQ9Y5Q5 1042 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 PNMA6FA0A0J9YX94 578 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 SGK1O00141 431 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 RNF103O00237 685 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 CLOCKO15516 846 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 HTRA2O43464 458 aaPredicted RBP9.27□□□□□ -0.93
HPS4-217ENST00000496385 NUAK1O60285 661 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 RFPL1O75677 317 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 CNTFP26441 200 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 GABRB2P47870 512 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 SERPINB9P50453 376 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 SNRPFP62306 86 aaKnown RBP9.27□□□□□ -0.93
HPS4-217ENST00000496385 PPIL2Q13356 520 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 MSS51Q4VC12 460 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 NHSL2Q5HYW2 709 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 TTC33Q6PID6 262 aaPredicted RBP9.27□□□□□ -0.93
HPS4-217ENST00000496385 MAMDC4Q6UXC1 1216 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 ENOSF1Q7L5Y1 443 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 SUN5Q8TC36 379 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 ATL1Q8WXF7 558 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 TFAP2CQ92754 450 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 FAM20AQ96MK3 541 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 SLITRK1Q96PX8 696 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 WDR83Q9BRX9 315 aaKnown RBP9.27□□□□□ -0.93
HPS4-217ENST00000496385 EFHD1Q9BUP0 239 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 COQ10BQ9H8M1 238 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 SIAEQ9HAT2 523 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 SLC38A10Q9HBR0 1119 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 RABL2BQ9UNT1 228 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 PHIPQ8WWQ0 1821 aa9.27□□□□□ -0.93
HPS4-217ENST00000496385 J3QRK9 145 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 KLHL41O60662 606 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 SERPINE1P05121 402 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 P4HBP07237 508 aaKnown RBP9.26□□□□□ -0.93
HPS4-217ENST00000496385 M6PRP20645 277 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 EPHA3P29320 983 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 SLC1A6P48664 564 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 CYP2J2P51589 502 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 CSE1LP55060 971 aaKnown RBP9.26□□□□□ -0.93
HPS4-217ENST00000496385 OCA2Q04671 838 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 CD300CQ08708 224 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 NOGQ13253 232 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 ALCAMQ13740 583 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 RAB39AQ14964 217 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 HERC3Q15034 1050 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 BBS9Q3SYG4 887 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 RINT1Q6NUQ1 792 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 USP17L2Q6R6M4 530 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 ANKRD13BQ86YJ7 626 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 MYCT1Q8N699 235 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 BHLHE22Q8NFJ8 381 aaPredicted RBP9.26□□□□□ -0.93
HPS4-217ENST00000496385 ACMSDQ8TDX5 336 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 RAB2BQ8WUD1 216 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 CHAC2Q8WUX2 184 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 DHX38Q92620 1227 aaKnown RBP9.26□□□□□ -0.93
HPS4-217ENST00000496385 FBXL8Q96CD0 374 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 TXNDC15Q96J42 360 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 CCDC17Q96LX7 622 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 HOXD1Q9GZZ0 328 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 RETREG1Q9H6L5 497 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 VAT1LQ9HCJ6 419 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 CD320Q9NPF0 282 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 ANLNQ9NQW6 1124 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 DDX56Q9NY93 547 aaKnown RBP9.26□□□□□ -0.93
HPS4-217ENST00000496385 POU2F3Q9UKI9 436 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 LOC105371267A0A1B0GV96 52 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 USP17L10C9JJH3 530 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 ACOT8O14734 319 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 MSI1O43347 362 aaKnown RBP9.26□□□□□ -0.93
HPS4-217ENST00000496385 AKAP10O43572 662 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 SCO2O43819 266 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 FOXD2O60548 495 aaPredicted RBP9.26□□□□□ -0.93
HPS4-217ENST00000496385 MTRF1O75570 445 aaKnown RBP9.26□□□□□ -0.93
HPS4-217ENST00000496385 RNASEH2AO75792 299 aaKnown RBP9.26□□□□□ -0.93
HPS4-217ENST00000496385 ETS1P14921 441 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 JUNBP17275 347 aaPredicted RBP9.26□□□□□ -0.93
HPS4-217ENST00000496385 TGM1P22735 817 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 PRKCHP24723 683 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 MAP4P27816 1152 aaKnown RBP9.26□□□□□ -0.93
HPS4-217ENST00000496385 POLR2BP30876 1174 aaKnown RBP9.26□□□□□ -0.93
HPS4-217ENST00000496385 PSMD8P48556 350 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 PSMC6P62333 389 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 ADAM17P78536 824 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 IFITM2Q01629 132 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 CDC20Q12834 499 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 PPM1LQ5SGD2 360 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 C6orf10Q5SRN2 563 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 GJC2Q5T442 439 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms