RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 C1orf74Q96LT6 269 aa17.59■□□□□ 0.41
COMMD3-214ENST00000496071 PCDHB18PQ96TA0 734 aa17.59■□□□□ 0.41
COMMD3-214ENST00000496071 SIK2Q9H0K1 926 aa17.59■□□□□ 0.41
COMMD3-214ENST00000496071 METTL5Q9NRN9 209 aaKnown RBP17.59■□□□□ 0.41
COMMD3-214ENST00000496071 USP36Q9P275 1121 aaKnown RBP17.59■□□□□ 0.41
COMMD3-214ENST00000496071 VANGL2Q9ULK5 521 aa17.59■□□□□ 0.41
COMMD3-214ENST00000496071 SPTBN4Q9H254 2564 aa17.58■□□□□ 0.41
COMMD3-214ENST00000496071 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.58■□□□□ 0.4
COMMD3-214ENST00000496071 A0A1B0GTH6 734 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 FAM170AA1A519 330 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 SLC30A4O14863 429 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 KHNYNO15037 678 aaKnown RBP17.58■□□□□ 0.4
COMMD3-214ENST00000496071 CLDN11O75508 207 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 ENDOD1O94919 500 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 ADCY5O95622 1261 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 SERPINC1P01008 464 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 C7P10643 843 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 TFE3P19532 575 aaPredicted RBP17.58■□□□□ 0.4
COMMD3-214ENST00000496071 CD6P30203 668 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 RDXP35241 583 aaKnown RBP17.58■□□□□ 0.4
COMMD3-214ENST00000496071 HOXD12P35452 270 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 NNMTP40261 264 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 PTGER3P43115 390 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 GSCP56915 257 aaPredicted RBP17.58■□□□□ 0.4
COMMD3-214ENST00000496071 ECT2LQ008S8 904 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 FOXK2Q01167 660 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 SULT2A1Q06520 285 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 ZNF33AQ06730 810 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 ZNF177Q13360 481 aaPredicted RBP17.58■□□□□ 0.4
COMMD3-214ENST00000496071 ARID5BQ14865 1188 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 RNF219Q5W0B1 726 aaPredicted RBP17.58■□□□□ 0.4
COMMD3-214ENST00000496071 LRRC31Q6UY01 552 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 DGLUCYQ7Z3D6 616 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 BNIPLQ7Z465 357 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 PHF13Q86YI8 300 aaPredicted RBP17.58■□□□□ 0.4
COMMD3-214ENST00000496071 IGSF8Q969P0 613 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 CFAP57Q96MR6 1250 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 C11orf70Q9BRQ4 267 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 ADAM33Q9BZ11 813 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 PRSS16Q9NQE7 514 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 SEPT11Q9NVA2 429 aaKnown RBP17.58■□□□□ 0.4
COMMD3-214ENST00000496071 ADAM22Q9P0K1 906 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 ERVW-1Q9UQF0 538 aa17.58■□□□□ 0.4
COMMD3-214ENST00000496071 GDF9O60383 454 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 IGLV3-19P01714 112 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 PDGFRAP16234 1089 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 SDC4P31431 198 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 TPMTP51580 245 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 ATXN1P54253 815 aaKnown RBP17.57■□□□□ 0.4
COMMD3-214ENST00000496071 CDH4P55283 916 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 ZBTB16Q05516 673 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 PTP4A2Q12974 167 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 PPP1R2P3Q6NXS1 205 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 ARMCX6Q7L4S7 300 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 IRF2BP2Q7Z5L9 587 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 RABEPKQ7Z6M1 372 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 APCDD1Q8J025 514 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 ZNF366Q8N895 744 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 FOXJ1Q92949 421 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 MYO19Q96H55 970 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 ZNF419Q96HQ0 510 aaPredicted RBP17.57■□□□□ 0.4
COMMD3-214ENST00000496071 MRGPRX3Q96LB0 322 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 HAPLN3Q96S86 360 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 NUP58Q9BVL2 599 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 EDEM3Q9BZQ6 932 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 SMOC1Q9H4F8 434 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 CBX8Q9HC52 389 aa17.57■□□□□ 0.4
COMMD3-214ENST00000496071 WSB2Q9NYS7 404 aaPredicted RBP17.57■□□□□ 0.4
COMMD3-214ENST00000496071 EVLQ9UI08 416 aaPredicted RBP17.57■□□□□ 0.4
COMMD3-214ENST00000496071 TARSL2A2RTX5 802 aaKnown RBP17.56■□□□□ 0.4
COMMD3-214ENST00000496071 KRT3P12035 628 aa17.56■□□□□ 0.4
COMMD3-214ENST00000496071 PTPN9P43378 593 aa17.56■□□□□ 0.4
COMMD3-214ENST00000496071 NR1I3Q14994 352 aa17.56■□□□□ 0.4
COMMD3-214ENST00000496071 HNRNPA1L2Q32P51 320 aaKnown RBP17.56■□□□□ 0.4
COMMD3-214ENST00000496071 ARL13BQ3SXY8 428 aa17.56■□□□□ 0.4
COMMD3-214ENST00000496071 SYCP2LQ5T4T6 812 aa17.56■□□□□ 0.4
COMMD3-214ENST00000496071 PEAR1Q5VY43 1037 aaPredicted RBP17.56■□□□□ 0.4
COMMD3-214ENST00000496071 CXorf57Q6NSI4 855 aaKnown RBP17.56■□□□□ 0.4
COMMD3-214ENST00000496071 TRNP1Q6NT89 227 aa17.56■□□□□ 0.4
COMMD3-214ENST00000496071 CIR1Q86X95 450 aaPredicted RBP17.56■□□□□ 0.4
COMMD3-214ENST00000496071 EMC1Q8N766 993 aa17.56■□□□□ 0.4
COMMD3-214ENST00000496071 CADM4Q8NFZ8 388 aa17.56■□□□□ 0.4
COMMD3-214ENST00000496071 CEP76Q8TAP6 659 aa17.56■□□□□ 0.4
COMMD3-214ENST00000496071 RXFP2Q8WXD0 754 aa17.56■□□□□ 0.4
COMMD3-214ENST00000496071 BAP1Q92560 729 aa17.56■□□□□ 0.4
COMMD3-214ENST00000496071 TOE1Q96GM8 510 aaKnown RBP17.56■□□□□ 0.4
COMMD3-214ENST00000496071 NAP1L5Q96NT1 182 aaPredicted RBP17.56■□□□□ 0.4
COMMD3-214ENST00000496071 SELENOOQ9BVL4 669 aa17.56■□□□□ 0.4
COMMD3-214ENST00000496071 NUSAP1Q9BXS6 441 aaKnown RBP17.56■□□□□ 0.4
COMMD3-214ENST00000496071 CD93Q9NPY3 652 aa17.56■□□□□ 0.4
COMMD3-214ENST00000496071 PILRBQ9UKJ0 227 aa17.56■□□□□ 0.4
COMMD3-214ENST00000496071 SCML1Q9UN30 329 aa17.56■□□□□ 0.4
COMMD3-214ENST00000496071 TBC1D30Q9Y2I9 924 aa17.56■□□□□ 0.4
COMMD3-214ENST00000496071 ITIH6Q6UXX5 1313 aa17.55■□□□□ 0.4
COMMD3-214ENST00000496071 C2CD4BA6NLJ0 364 aa17.55■□□□□ 0.4
COMMD3-214ENST00000496071 DRGXA6NNA5 263 aa17.55■□□□□ 0.4
COMMD3-214ENST00000496071 GOLGA6L19H0YKK7 550 aa17.55■□□□□ 0.4
COMMD3-214ENST00000496071 RNASEH1O60930 286 aaKnown RBP17.55■□□□□ 0.4
COMMD3-214ENST00000496071 DNTTP04053 509 aa17.55■□□□□ 0.4
COMMD3-214ENST00000496071 TNFAIP3P21580 790 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms