RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	PLK1	P53350	603 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	CENPC	Q03188	943 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	DEUP1	Q05D60	604 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	SLC12A1	Q13621	1099 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	ARID5B	Q14865	1188 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	CLEC16A	Q2KHT3	1053 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	PLEKHG6	Q3KR16	790 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	RABGAP1L	Q5R372	815 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	ARTN	Q5T4W7	220 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	LYSMD4	Q5XG99	296 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	CXorf57	Q6NSI4	855 aa	Known RBP	11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	ARMCX6	Q7L4S7	300 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	DGLUCY	Q7Z3D6	616 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	IRF2BP2	Q7Z5L9	587 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	PHF13	Q86YI8	300 aa	Predicted RBP	11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	SYT12	Q8IV01	421 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	SLC41A1	Q8IVJ1	513 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	APCDD1	Q8J025	514 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	DEFB119	Q8N690	84 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	C12orf50	Q8NA57	414 aa	Predicted RBP	11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	KDM1B	Q8NB78	822 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	OR2T3	Q8NH03	318 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	PIGK	Q92643	395 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	PRCC	Q92733	491 aa	Predicted RBP	11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	ALG14	Q96F25	216 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	SIPA1	Q96FS4	1042 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	ZNF419	Q96HQ0	510 aa	Predicted RBP	11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	CFAP57	Q96MR6	1250 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	RPRD1A	Q96P16	312 aa	Predicted RBP	11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	TKTL2	Q9H0I9	626 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	SIK2	Q9H0K1	926 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	WSB2	Q9NYS7	404 aa	Predicted RBP	11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	SUN2	Q9UH99	717 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	VANGL2	Q9ULK5	521 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	MYO6	Q9UM54	1294 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643	ERVW-1	Q9UQF0	538 aa		11.3	□□□□□ -0.6
DCTN1-223	ENST00000495643		A0A1B0GTH6	734 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	LNP1	A1A4G5	178 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	TM4SF5	O14894	197 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	MOCS3	O95396	460 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	SRPRA	P08240	638 aa	Known RBP	11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	ITPKA	P23677	461 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	MZF1	P28698	734 aa	Predicted RBP	11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	CD6	P30203	668 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	GGCX	P38435	758 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	GSC	P56915	257 aa	Predicted RBP	11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	ECT2L	Q008S8	904 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	ZNF33A	Q06730	810 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	HNRNPA1L2	Q32P51	320 aa	Known RBP	11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	PHLDB2	Q86SQ0	1253 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	EMC1	Q8N766	993 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	OR52K2	Q8NGK3	314 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	BAP1	Q92560	729 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	TOE1	Q96GM8	510 aa	Known RBP	11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	C1orf74	Q96LT6	269 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	AGPAT1	Q99943	283 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	C11orf70	Q9BRQ4	267 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	SYT11	Q9BT88	431 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	MTG2	Q9H4K7	406 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	FBRS	Q9HAH7	460 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	CBX8	Q9HC52	389 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	METTL5	Q9NRN9	209 aa	Known RBP	11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	TMPRSS4	Q9NRS4	437 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	EVL	Q9UI08	416 aa	Predicted RBP	11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	SLCO3A1	Q9UIG8	710 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	TBC1D30	Q9Y2I9	924 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	PAXBP1	Q9Y5B6	917 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	ITIH6	Q6UXX5	1313 aa		11.29	□□□□□ -0.6
DCTN1-223	ENST00000495643	IGLV3-10	A0A075B6K4	115 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643		A0A1W2PQC6	194 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	DCDC2B	A2VCK2	349 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	C2CD4B	A6NLJ0	364 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	DRGX	A6NNA5	263 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	TTC34	A8MYJ7	566 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	KHNYN	O15037	678 aa	Known RBP	11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	NDUFS2	O75306	463 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	CLDN11	O75508	207 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	CNTN5	O94779	1100 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	GJB6	O95452	261 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	ACADM	P11310	421 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	PDGFRA	P16234	1089 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	FER	P16591	822 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	OXTR	P30559	389 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	HOXD12	P35452	270 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	DPP6	P42658	865 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	PTPN9	P43378	593 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	NSF	P46459	744 aa	Known RBP	11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	CDH4	P55283	916 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	OXCT1	P55809	520 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	ST8SIA6	P61647	398 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	RPS14	P62263	151 aa	Known RBP	11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	IRX4	P78413	519 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	FOXK2	Q01167	660 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	NR1I3	Q14994	352 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	CCDC14	Q49A88	953 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	FILIP1L	Q4L180	1135 aa		11.28	□□□□□ -0.6
DCTN1-223	ENST00000495643	RAB6C	Q53S08	254 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms