RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, human

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM53-209	ENST00000495630	WNT9A	O14904	365 aa		18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	MOCS3	O95396	460 aa		18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	LTF	P02788	710 aa		18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	C5AR1	P21730	350 aa		18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	TBXAS1	P24557	533 aa	Predicted RBP	18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	RGS7	P49802	495 aa		18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	RPS24	P62847	133 aa	Known RBP	18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	CDH18	Q13634	790 aa		18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	PKP1	Q13835	747 aa		18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	HES3	Q5TGS1	186 aa		18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	TCERG1L	Q5VWI1	586 aa		18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	KRBA2	Q6ZNG9	492 aa		18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	CARNMT1	Q8N4J0	409 aa		18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	UBR7	Q8N806	425 aa		18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	BAP1	Q92560	729 aa		18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	HSFY1	Q96LI6	401 aa		18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	TLR6	Q9Y2C9	796 aa		18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	TMEM131	Q92545	1883 aa		18.18	■□□□□ 0.5
TMEM53-209	ENST00000495630	COL5A1	P20908	1838 aa	Predicted RBP	18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	BPTF	Q12830	3046 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	TTC34	A8MYJ7	566 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	TLX3	O43711	291 aa	Predicted RBP	18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	FBXO21	O94952	628 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	ADH1B	P00325	375 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	CENPB	P07199	599 aa	Predicted RBP	18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	CKMT2	P17540	419 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	EPHA8	P29322	1005 aa	Predicted RBP	18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	NXPH1	P58417	271 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	ECT2L	Q008S8	904 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	BNIP3	Q12983	259 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	NNT	Q13423	1086 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	FSCB	Q5H9T9	825 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	MS4A13	Q5J8X5	152 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	PITRM1	Q5JRX3	1037 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	MFSD2A	Q8NA29	543 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	OR14C36	Q8NHC7	312 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	TFAP2B	Q92481	460 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	MYEOV	Q96EZ4	313 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	FCRL2	Q96LA5	508 aa	Predicted RBP	18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	PRICKLE1	Q96MT3	831 aa	Predicted RBP	18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	SLCO3A1	Q9UIG8	710 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	RAI2	Q9Y5P3	530 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	ITIH6	Q6UXX5	1313 aa		18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	MUC22	E2RYF6	1773 aa	Predicted RBP	18.17	■□□□□ 0.5
TMEM53-209	ENST00000495630	HELZ2	Q9BYK8	2649 aa	Known RBP	18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	TBC1D3D	A0A087WVF3	549 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	TBC1D3I	A0A087WXS9	549 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	TBC1D3E	A0A087X179	549 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	TBC1D3K	A0A087X1G2	549 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	TBC1D3F	A6NER0	549 aa	Predicted RBP	18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	TBC1D3L	B9A6J9	549 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	SLC16A3	O15427	465 aa	Known RBP	18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	LAT	O43561	262 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	MAGEC1	O60732	1142 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	TBC1D3H	P0C7X1	549 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	NUDT1	P36639	197 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	NNMT	P40261	264 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	CTSO	P43234	321 aa	Predicted RBP	18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	ADPRH	P54922	357 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	CLDN6	P56747	220 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	STIL	Q15468	1287 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	DCAF6	Q58WW2	860 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	DCAF17	Q5H9S7	520 aa	Predicted RBP	18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	RNF219	Q5W0B1	726 aa	Predicted RBP	18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	TBC1D3G	Q6DHY5	549 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	TBC1D3C	Q6IPX1	549 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	PRPF39	Q86UA1	669 aa	Known RBP	18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	IQCH	Q86VS3	1027 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	TBC1D3	Q8IZP1	549 aa	Predicted RBP	18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	STK40	Q8N2I9	435 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	AADAT	Q8N5Z0	425 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	SNIP1	Q8TAD8	396 aa	Known RBP	18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	FGF11	Q92914	225 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	PTPRN2	Q92932	1015 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	SLC39A13	Q96H72	371 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	SERPINB11	Q96P15	392 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	KDM4C	Q9H3R0	1056 aa		18.16	■□□□□ 0.5
TMEM53-209	ENST00000495630	PIK3R2	O00459	728 aa		18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	LUC7L3	O95232	432 aa	Known RBP	18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	PRB1	P04280	392 aa		18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	FYN	P06241	537 aa		18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	PSMD8	P48556	350 aa		18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	FKBP3	Q00688	224 aa	Known RBP	18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	OVGP1	Q12889	678 aa		18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	LRMP	Q12912	555 aa		18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	SLC12A1	Q13621	1099 aa		18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	SFMBT2	Q5VUG0	894 aa		18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	NAPEPLD	Q6IQ20	393 aa		18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	TMEM270	Q6UE05	265 aa		18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	MMS22L	Q6ZRQ5	1243 aa		18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	HSCB	Q8IWL3	235 aa		18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	CFAP52	Q8N1V2	620 aa		18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	RFFL	Q8WZ73	363 aa		18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	NUCKS1	Q9H1E3	243 aa	Known RBP	18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	CEP83	Q9Y592	693 aa		18.15	■□□□□ 0.5
TMEM53-209	ENST00000495630	C1QL1	O75973	258 aa		18.14	■□□□□ 0.49
TMEM53-209	ENST00000495630	ZNF202	O95125	648 aa		18.14	■□□□□ 0.49
TMEM53-209	ENST00000495630	IL1B	P01584	269 aa		18.14	■□□□□ 0.49
TMEM53-209	ENST00000495630	KRT85	P78386	507 aa		18.14	■□□□□ 0.49
TMEM53-209	ENST00000495630	E2F1	Q01094	437 aa		18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms