RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 WLSQ5T9L3 541 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 OLFML1Q6UWY5 402 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 GPC2Q8N158 579 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 ACVR1CQ8NER5 493 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 PIWIL2Q8TC59 973 aaKnown RBP13.77□□□□□ -0.21
GPC1-209ENST00000495100 ZBED3Q96IU2 234 aaPredicted RBP13.77□□□□□ -0.21
GPC1-209ENST00000495100 SYT15Q9BQS2 421 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 FICDQ9BVA6 458 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 FTHL17Q9BXU8 183 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 LHX5Q9H2C1 402 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 SPATS2LQ9NUQ6 558 aaKnown RBP13.77□□□□□ -0.21
GPC1-209ENST00000495100 UTP6Q9NYH9 597 aaKnown RBP13.77□□□□□ -0.21
GPC1-209ENST00000495100 TAGLN3Q9UI15 199 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 TTC3P53804 2025 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 NDC80O14777 642 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 PPP1R12AO14974 1030 aaPredicted RBP13.77□□□□□ -0.21
GPC1-209ENST00000495100 DLDP09622 509 aaKnown RBP13.77□□□□□ -0.21
GPC1-209ENST00000495100 IL4RP24394 825 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 EPHX2P34913 555 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 CDH13P55290 713 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 CNGA3Q16281 694 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 PITRM1Q5JRX3 1037 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 C9orf57Q5W0N0 161 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 SCIMPQ6UWF3 145 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 FASTKD5Q7L8L6 764 aaKnown RBP13.77□□□□□ -0.21
GPC1-209ENST00000495100 CDRT15Q96T59 188 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 SNX15Q9NRS6 342 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 ADARB2Q9NS39 739 aaKnown RBP13.77□□□□□ -0.21
GPC1-209ENST00000495100 OR12D3Q9UGF7 316 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 ANGPTL2Q9UKU9 493 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 AURKCQ9UQB9 309 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 TRIP11Q15643 1979 aa13.77□□□□□ -0.21
GPC1-209ENST00000495100 SOAT2O75908 522 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 ATG7O95352 703 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 PIGNO95427 931 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 ICAM3P32942 547 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 CSE1LP55060 971 aaKnown RBP13.76□□□□□ -0.21
GPC1-209ENST00000495100 MPP1Q00013 466 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 ARHGAP1Q07960 439 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 ACVR2BQ13705 512 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 KCNJ11Q14654 390 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 PDK1Q15118 436 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 KIF19Q2TAC6 998 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 PPP1R15BQ5SWA1 713 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 NUP93Q8N1F7 819 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 TDRD5Q8NAT2 981 aaKnown RBP13.76□□□□□ -0.21
GPC1-209ENST00000495100 CYP3A43Q9HB55 503 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 CCDC167Q9P0B6 97 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 SLC7A8Q9UHI5 535 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 UBQLN1Q9UMX0 589 aaKnown RBP13.76□□□□□ -0.21
GPC1-209ENST00000495100 HBS1LQ9Y450 684 aaKnown RBP13.76□□□□□ -0.21
GPC1-209ENST00000495100 TRDMT1O14717 391 aaKnown RBP13.76□□□□□ -0.21
GPC1-209ENST00000495100 CHADO15335 359 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 BPGMP07738 259 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 SMIM10L2AP0DMW4 78 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 SMIM10L2BP0DMW5 78 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 CD1EP15812 388 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 RAG1P15918 1043 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 ZNF484Q5JVG2 852 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 ANO7Q6IWH7 933 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 ARHGAP36Q6ZRI8 547 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 EXOC8Q8IYI6 725 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 SH3TC2Q8TF17 1288 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 EXOC2Q96KP1 924 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 SENP8Q96LD8 212 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 TRIM8Q9BZR9 551 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 GBA2Q9HCG7 927 aaPredicted RBP13.76□□□□□ -0.21
GPC1-209ENST00000495100 A0A0A0MRY4 1105 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 F8W810 466 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 FZD9O00144 591 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 RFPL1O75677 317 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 ALADP13716 330 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 ARL13BQ3SXY8 428 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 TRIM67Q6ZTA4 783 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 ASRGL1Q7L266 308 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 PLPPR4Q7Z2D5 763 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 LCA5Q86VQ0 697 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 KCNMB4Q86W47 210 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 SPATA13Q96N96 652 aa13.76□□□□□ -0.21
GPC1-209ENST00000495100 COPS7BQ9H9Q2 264 aaPredicted RBP13.76□□□□□ -0.21
GPC1-209ENST00000495100 XPO1O14980 1071 aaKnown RBP13.75□□□□□ -0.21
GPC1-209ENST00000495100 PIGRP01833 764 aa13.75□□□□□ -0.21
GPC1-209ENST00000495100 PTPN1P18031 435 aaKnown RBP13.75□□□□□ -0.21
GPC1-209ENST00000495100 CLDN10P78369 228 aa13.75□□□□□ -0.21
GPC1-209ENST00000495100 PRKD1Q15139 912 aaPredicted RBP13.75□□□□□ -0.21
GPC1-209ENST00000495100 CERS2Q96G23 380 aa13.75□□□□□ -0.21
GPC1-209ENST00000495100 LRGUKQ96M69 825 aa13.75□□□□□ -0.21
GPC1-209ENST00000495100 FGD4Q96M96 766 aa13.75□□□□□ -0.21
GPC1-209ENST00000495100 ZNFX1Q9P2E3 1918 aaKnown RBP13.75□□□□□ -0.21
GPC1-209ENST00000495100 SMNDC1O75940 238 aaKnown RBP eCLIP13.75□□□□□ -0.21
GPC1-209ENST00000495100 CELF2O95319 508 aaKnown RBP13.75□□□□□ -0.21
GPC1-209ENST00000495100 PRKCGP05129 697 aa13.75□□□□□ -0.21
GPC1-209ENST00000495100 NMBRP28336 390 aa13.75□□□□□ -0.21
GPC1-209ENST00000495100 THPOP40225 353 aa13.75□□□□□ -0.21
GPC1-209ENST00000495100 CLCNKBP51801 687 aa13.75□□□□□ -0.21
GPC1-209ENST00000495100 MAPK10P53779 464 aa13.75□□□□□ -0.21
GPC1-209ENST00000495100 GSCP56915 257 aaPredicted RBP13.75□□□□□ -0.21
GPC1-209ENST00000495100 ZNF470Q6ECI4 717 aa13.75□□□□□ -0.21
GPC1-209ENST00000495100 PDZD4Q76G19 769 aaPredicted RBP13.75□□□□□ -0.21
GPC1-209ENST00000495100 TLK2Q86UE8 772 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms