RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 FGFR1OPO95684 399 aaKnown RBP12.04□□□□□ -0.48
VTI1A-208ENST00000494728 SEMA4FO95754 770 aa12.04□□□□□ -0.48
VTI1A-208ENST00000494728 IGHV4-34P06331 123 aa12.04□□□□□ -0.48
VTI1A-208ENST00000494728 ATP5BP06576 529 aaKnown RBP12.04□□□□□ -0.48
VTI1A-208ENST00000494728 SYPP08247 313 aa12.04□□□□□ -0.48
VTI1A-208ENST00000494728 GNSP15586 552 aa12.04□□□□□ -0.48
VTI1A-208ENST00000494728 MZF1P28698 734 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-208ENST00000494728 MTIF2P46199 727 aaKnown RBP12.04□□□□□ -0.48
VTI1A-208ENST00000494728 METAP1P53582 386 aa12.04□□□□□ -0.48
VTI1A-208ENST00000494728 KCNMA1Q12791 1236 aa12.04□□□□□ -0.48
VTI1A-208ENST00000494728 NAXDQ8IW45 347 aa12.04□□□□□ -0.48
VTI1A-208ENST00000494728 PIP4P2Q8N4L2 257 aa12.04□□□□□ -0.48
VTI1A-208ENST00000494728 IGSF8Q969P0 613 aa12.04□□□□□ -0.48
VTI1A-208ENST00000494728 BIRC7Q96CA5 298 aa12.04□□□□□ -0.48
VTI1A-208ENST00000494728 PPP1R13BQ96KQ4 1090 aa12.04□□□□□ -0.48
VTI1A-208ENST00000494728 RPL10LQ96L21 214 aaKnown RBP12.04□□□□□ -0.48
VTI1A-208ENST00000494728 IRX2Q9BZI1 471 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-208ENST00000494728 EBF2Q9HAK2 575 aa12.04□□□□□ -0.48
VTI1A-208ENST00000494728 SLCO3A1Q9UIG8 710 aa12.04□□□□□ -0.48
VTI1A-208ENST00000494728 DNAJC12Q9UKB3 198 aa12.04□□□□□ -0.48
VTI1A-208ENST00000494728 RALYQ9UKM9 306 aaKnown RBP12.04□□□□□ -0.48
VTI1A-208ENST00000494728 ERVW-1Q9UQF0 538 aa12.04□□□□□ -0.48
VTI1A-208ENST00000494728 FHOD1Q9Y613 1164 aa12.04□□□□□ -0.48
VTI1A-208ENST00000494728 ITIH6Q6UXX5 1313 aa12.04□□□□□ -0.48
VTI1A-208ENST00000494728 KCNU1A8MYU2 1149 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 C10orf142B7Z368 130 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 MID1O15344 667 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 CBFA2T3O75081 653 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 DAB1O75553 588 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 APOEP02649 317 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 DNTTP04053 509 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 PROS1P07225 676 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 PDGFRAP16234 1089 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 CSNK1EP49674 416 aaKnown RBP12.03□□□□□ -0.48
VTI1A-208ENST00000494728 MAN2A1Q16706 1144 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 KIF19Q2TAC6 998 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 C2CD6Q53TS8 623 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 C9orf64Q5T6V5 341 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 ZNF776Q68DI1 518 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-208ENST00000494728 C14orf80Q86SX3 495 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 CCAR2Q8N163 923 aaKnown RBP12.03□□□□□ -0.48
VTI1A-208ENST00000494728 AADATQ8N5Z0 425 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 MLKLQ8NB16 471 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 BTN2A3PQ96KV6 586 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 PABPC3Q9H361 631 aaKnown RBP12.03□□□□□ -0.48
VTI1A-208ENST00000494728 SLC32A1Q9H598 525 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 GAREM1Q9H706 876 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 TM9SF3Q9HD45 589 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 DDIT4Q9NX09 232 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 CHMP5Q9NZZ3 219 aa12.03□□□□□ -0.48
VTI1A-208ENST00000494728 A0A1W2PP55 124 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 TYW5A2RUC4 315 aaKnown RBP12.02□□□□□ -0.49
VTI1A-208ENST00000494728 F5H5T6 163 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 H0Y626 953 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 HSF2BPO75031 334 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 FSBPO95073 299 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 ASLP04424 464 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 KCNJ12Q14500 433 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 ARID5BQ14865 1188 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 E2F5Q15329 346 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 CST6Q15828 149 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 HLA-BQ31612 363 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 ARTNQ5T4W7 220 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 TRNP1Q6NT89 227 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 FBXL22Q6P050 247 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 MMAAQ8IVH4 418 aaKnown RBP12.02□□□□□ -0.49
VTI1A-208ENST00000494728 FAM71AQ8IYT1 594 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 STK40Q8N2I9 435 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 CHCHD4Q8N4Q1 142 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 PNPLA1Q8N8W4 532 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 BAHD1Q8TBE0 780 aaPredicted RBP12.02□□□□□ -0.49
VTI1A-208ENST00000494728 PTPRN2Q92932 1015 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 ALG14Q96F25 216 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 FAM129BQ96TA1 746 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 DDX50Q9BQ39 737 aaKnown RBP12.02□□□□□ -0.49
VTI1A-208ENST00000494728 BTBD1Q9H0C5 482 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 NDST4Q9H3R1 872 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 FBRSQ9HAH7 460 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 TMPRSS4Q9NRS4 437 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 SAMSN1Q9NSI8 373 aaKnown RBP12.02□□□□□ -0.49
VTI1A-208ENST00000494728 PIGVQ9NUD9 493 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 ASNSD1Q9NWL6 643 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 PCOLCE2Q9UKZ9 415 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 BTBD3Q9Y2F9 522 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 SNX11Q9Y5W9 270 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 SNX10Q9Y5X0 201 aa12.02□□□□□ -0.49
VTI1A-208ENST00000494728 COL5A1P20908 1838 aaPredicted RBP12.02□□□□□ -0.49
VTI1A-208ENST00000494728 CACNA1GO43497 2377 aa12.01□□□□□ -0.49
VTI1A-208ENST00000494728 ATRXP46100 2492 aa12.01□□□□□ -0.49
VTI1A-208ENST00000494728 TDRD6O60522 2096 aaKnown RBP12.01□□□□□ -0.49
VTI1A-208ENST00000494728 A0A1B0GVM2 712 aa12.01□□□□□ -0.49
VTI1A-208ENST00000494728 TCAF2A6NFQ2 919 aa12.01□□□□□ -0.49
VTI1A-208ENST00000494728 PLK4O00444 970 aa12.01□□□□□ -0.49
VTI1A-208ENST00000494728 KCNK3O14649 394 aa12.01□□□□□ -0.49
VTI1A-208ENST00000494728 WNT9AO14904 365 aa12.01□□□□□ -0.49
VTI1A-208ENST00000494728 GLI1P08151 1106 aa12.01□□□□□ -0.49
VTI1A-208ENST00000494728 FTH1P19P0C7X4 201 aa12.01□□□□□ -0.49
VTI1A-208ENST00000494728 PRKCSHP14314 528 aaPredicted RBP12.01□□□□□ -0.49
VTI1A-208ENST00000494728 MATKP42679 507 aa12.01□□□□□ -0.49
VTI1A-208ENST00000494728 PSMD8P48556 350 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms