RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 ZBTB24O43167 697 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-225ENST00000494465 GJA8P48165 433 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 PSEN1P49768 467 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 TBX4P57082 545 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 PSMD5Q16401 504 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 LRRC8BQ6P9F7 803 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 UNC5AQ6ZN44 842 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 GIPC2Q8TF65 315 aa16.96■□□□□ 0.31
ATG4B-225ENST00000494465 ZNF473Q8WTR7 871 aaKnown RBP16.96■□□□□ 0.31
ATG4B-225ENST00000494465 ZNF317Q96PQ6 595 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-225ENST00000494465 PRMT1Q99873 361 aaKnown RBP16.96■□□□□ 0.31
ATG4B-225ENST00000494465 TLR8Q9NR97 1041 aaKnown RBP16.96■□□□□ 0.31
ATG4B-225ENST00000494465 A0A1W2PPM1 405 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 MTSS1O43312 755 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 PRKCHP24723 683 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 OR1D2P34982 312 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 CCT5P48643 541 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 TUBP50607 506 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 RPL10AP62906 217 aaKnown RBP16.95■□□□□ 0.3
ATG4B-225ENST00000494465 DEFB103AP81534 67 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 ZNF33AQ06730 810 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 TEX44Q53QW1 395 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 AFMIDQ63HM1 303 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 ARHGAP36Q6ZRI8 547 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 SLC44A1Q8WWI5 657 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 ARMC5Q96C12 935 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 TSGA13Q96PP4 275 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 TTLL2Q9BWV7 592 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 TRABDQ9H4I3 376 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 CATSPERBQ9H7T0 1116 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 KCNK9Q9NPC2 374 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 SLC38A8A6NNN8 435 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 CPP00450 1065 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 SLC2A3P11169 496 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 KRT15P19012 456 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 SARNPP82979 210 aaKnown RBP16.95■□□□□ 0.3
ATG4B-225ENST00000494465 PAWRQ96IZ0 340 aaKnown RBP16.95■□□□□ 0.3
ATG4B-225ENST00000494465 CLSTN3Q9BQT9 956 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 MPP6Q9NZW5 540 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 PCDH10Q9P2E7 1040 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 MRPL42Q9Y6G3 142 aaKnown RBP16.95■□□□□ 0.3
ATG4B-225ENST00000494465 KIAA0100Q14667 2235 aaKnown RBP16.95■□□□□ 0.3
ATG4B-225ENST00000494465 PTPRSQ13332 1948 aa16.95■□□□□ 0.3
ATG4B-225ENST00000494465 ABHD14A-ACY1A0A1B0GW23 586 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 IGLV3-27P01718 113 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 GSTA2P09210 222 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 STX2P32856 288 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 MSH2P43246 934 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 LRRC14Q15048 493 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 TRIP4Q15650 581 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-225ENST00000494465 MS4A13Q5J8X5 152 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 KCTD11Q693B1 232 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 FBXO46Q6PJ61 603 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-225ENST00000494465 RTL3Q8N8U3 475 aaKnown RBP16.94■□□□□ 0.3
ATG4B-225ENST00000494465 MGARPQ8TDB4 240 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 ARNTL2Q8WYA1 636 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 ZNF419Q96HQ0 510 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-225ENST00000494465 AGAP3Q96P47 875 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 SLC39A8Q9C0K1 460 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 GBA3Q9H227 469 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 SMYD2Q9NRG4 433 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 OLA1Q9NTK5 396 aaKnown RBP16.94■□□□□ 0.3
ATG4B-225ENST00000494465 SENP1Q9P0U3 644 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 TRHDEQ9UKU6 1024 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 TRIM43BA6NCK2 446 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 WASH4PA8MWX3 477 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 CXorf49A8MYA2 514 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-225ENST00000494465 TRDMT1O14717 391 aaKnown RBP16.94■□□□□ 0.3
ATG4B-225ENST00000494465 APOEP02649 317 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 OLIG2Q13516 323 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 SPARCL1Q14515 664 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 QPCTQ16769 361 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 LZTR1Q8N653 840 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 CNTD1Q8N815 330 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 ANKRD42Q8N9B4 389 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 ANKLE1Q8NAG6 615 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 TRIM43Q96BQ3 446 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-225ENST00000494465 TEKT5Q96M29 485 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 VAT1Q99536 393 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 C11orf49Q9H6J7 331 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 PRDM5Q9NQX1 630 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-225ENST00000494465 PIH1D1Q9NWS0 290 aaKnown RBP16.94■□□□□ 0.3
ATG4B-225ENST00000494465 MARCH2Q9P0N8 246 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 MAD1L1Q9Y6D9 718 aa16.94■□□□□ 0.3
ATG4B-225ENST00000494465 DFFAO00273 331 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 C2CD2LO14523 706 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 PRPF4O43172 522 aaKnown RBP eCLIP16.93■□□□□ 0.31e-6■■■■■ 30.2
ATG4B-225ENST00000494465 MAFKO60675 156 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 SUN1O94901 812 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 CSF2RAP15509 400 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 DRD4P21917 467 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 CCNCP24863 283 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 IFNAR2P48551 515 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 CRADDP78560 199 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 COG7P83436 770 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 C10orf120Q5SQS8 335 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 TRMT10BQ6PF06 316 aaKnown RBP16.93■□□□□ 0.3
ATG4B-225ENST00000494465 MIB1Q86YT6 1006 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 SLC39A11Q8N1S5 342 aa16.93■□□□□ 0.3
ATG4B-225ENST00000494465 CHMP6Q96FZ7 201 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms