RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 GFPT1Q06210 699 aaPredicted RBP8.82□□□□□ -1
LRCH3-219ENST00000494069 CDH18Q13634 790 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 KRT31Q15323 416 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 PLEKHG6Q3KR16 790 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 EFHC1Q5JVL4 640 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 C9orf64Q5T6V5 341 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 DCAF12L1Q5VU92 463 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 CDKAL1Q5VV42 579 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 TRNP1Q6NT89 227 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 FBXL22Q6P050 247 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 RBM43Q6ZSC3 357 aaKnown RBP8.82□□□□□ -1
LRCH3-219ENST00000494069 SLC26A9Q7LBE3 791 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 PHLDB2Q86SQ0 1253 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 DHX40Q8IX18 779 aaKnown RBP8.82□□□□□ -1
LRCH3-219ENST00000494069 ZCCHC9Q8N567 271 aaKnown RBP8.82□□□□□ -1
LRCH3-219ENST00000494069 MINDY1Q8N5J2 469 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 ATP6V0D2Q8N8Y2 350 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 CEP76Q8TAP6 659 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 SLC20A1Q8WUM9 679 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 DNASE2BQ8WZ79 361 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 FOXJ1Q92949 421 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 RNF34Q969K3 372 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 TRIM62Q9BVG3 475 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 NUP58Q9BVL2 599 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 IRX2Q9BZI1 471 aaPredicted RBP8.82□□□□□ -1
LRCH3-219ENST00000494069 GANQ9H2C0 597 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 C6orf106Q9H6K1 298 aaPredicted RBP8.82□□□□□ -1
LRCH3-219ENST00000494069 SYNCQ9H7C4 482 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 PIGVQ9NUD9 493 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.82□□□□□ -1
LRCH3-219ENST00000494069 ASNSD1Q9NWL6 643 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 KIAA1522Q9P206 1035 aaPredicted RBP8.82□□□□□ -1
LRCH3-219ENST00000494069 SERGEFQ9UGK8 458 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 EIF2B4Q9UI10 523 aaKnown RBP8.82□□□□□ -1
LRCH3-219ENST00000494069 ERVW-1Q9UQF0 538 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 HS3ST4Q9Y661 456 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 PCDH15Q96QU1 1955 aa8.82□□□□□ -1
LRCH3-219ENST00000494069 SPAARA0A1B0GVQ0 90 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 TYW5A2RUC4 315 aaKnown RBP8.81□□□□□ -1
LRCH3-219ENST00000494069 F5H5T6 163 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 F8VZ95 297 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 M0QYT0 321 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 ARHGAP33O14559 1287 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 DAB1O75553 588 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 CNTN5O94779 1100 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 GFPT2O94808 682 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 ADCY5O95622 1261 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 CD59P13987 128 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 PDGFRAP16234 1089 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 ABCB4P21439 1286 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 EEF1GP26641 437 aaKnown RBP8.81□□□□□ -1
LRCH3-219ENST00000494069 OXTRP30559 389 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 CCR1P32246 355 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 CDH5P33151 784 aaPredicted RBP8.81□□□□□ -1
LRCH3-219ENST00000494069 NOS2P35228 1153 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 METAP1P53582 386 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 ATXN3P54252 364 aaPredicted RBP8.81□□□□□ -1
LRCH3-219ENST00000494069 FAM193AP78312 1265 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 LSM11P83369 360 aaKnown RBP eCLIP8.81□□□□□ -1
LRCH3-219ENST00000494069 ECT2LQ008S8 904 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 ZNF252P-AS1Q0IIN9 211 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 GRIK2Q13002 908 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 SEMA3BQ13214 749 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 AUHQ13825 339 aaKnown RBP8.81□□□□□ -1
LRCH3-219ENST00000494069 HNRNPA1L2Q32P51 320 aaKnown RBP8.81□□□□□ -1
LRCH3-219ENST00000494069 RAB6CQ53S08 254 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 WDR45BQ5MNZ6 344 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 SYCP2LQ5T4T6 812 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 ARTNQ5T4W7 220 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 NAA35Q5VZE5 725 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 CXorf57Q6NSI4 855 aaKnown RBP8.81□□□□□ -1
LRCH3-219ENST00000494069 LAYNQ6UX15 382 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 PIP4P1Q86T03 277 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 XYLT1Q86Y38 959 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 CCAR2Q8N163 923 aaKnown RBP8.81□□□□□ -1
LRCH3-219ENST00000494069 TMEM35BQ8NCS4 154 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 ZNF397Q8NF99 534 aaPredicted RBP8.81□□□□□ -1
LRCH3-219ENST00000494069 CADM4Q8NFZ8 388 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 C1orf216Q8TAB5 229 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 EPS8L1Q8TE68 723 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 CPA5Q8WXQ8 436 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 ALG14Q96F25 216 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 CAMK1GQ96NX5 476 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 NOX5Q96PH1 765 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 FAM129BQ96TA1 746 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 TBCBQ99426 244 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 NPY6RQ99463 290 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 STK33Q9BYT3 514 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 SIK2Q9H0K1 926 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 RAB6CQ9H0N0 254 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 RSPH9Q9H1X1 276 aaPredicted RBP8.81□□□□□ -1
LRCH3-219ENST00000494069 PDCL3Q9H2J4 239 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 IL21RQ9HBE5 538 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 NLRC4Q9NPP4 1024 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 FAM207AQ9NSI2 230 aaPredicted RBP8.81□□□□□ -1
LRCH3-219ENST00000494069 SUN2Q9UH99 717 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 SLC12A6Q9UHW9 1150 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 VANGL2Q9ULK5 521 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 CACNA1EQ15878 2313 aa8.81□□□□□ -1
LRCH3-219ENST00000494069 A0A1B0GTW7 788 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms