RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-222	ENST00000493792	APBB3	O95704	486 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	FTL	P02792	175 aa	Predicted RBP	10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	SERPING1	P05155	500 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	PABPC1	P11940	636 aa	Known RBP	10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	HOXB2	P14652	356 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	RRM1	P23921	792 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	HLA-F	P30511	346 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	NTSR1	P30989	418 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	CD70	P32970	193 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	RFC1	P35251	1148 aa	Predicted RBP	10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	CXCR3	P49682	368 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	NUMB	P49757	651 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	MTA1	Q13330	715 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	TRIM14	Q14142	442 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	PLK5	Q496M5	336 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	CCDC14	Q49A88	953 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	HSF5	Q4G112	596 aa	Predicted RBP	10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	FNDC3B	Q53EP0	1204 aa	Known RBP	10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	MPP7	Q5T2T1	576 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	RNF43	Q68DV7	783 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	SCYL2	Q6P3W7	929 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	WDR59	Q6PJI9	974 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	LRRC31	Q6UY01	552 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	ZNF557	Q8N988	423 aa	Predicted RBP	10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	C3orf20	Q8ND61	904 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	WFDC5	Q8TCV5	224 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	WFIKKN2	Q8TEU8	576 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	HMGB4	Q8WW32	186 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	SORCS1	Q8WY21	1168 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	SYN2	Q92777	582 aa	Predicted RBP	10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	ZNF653	Q96CK0	615 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	ACOX2	Q99424	681 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	ADAM33	Q9BZ11	813 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	IRX2	Q9BZI1	471 aa	Predicted RBP	10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	TPSD1	Q9BZJ3	242 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	TMPRSS4	Q9NRS4	437 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	VPS45	Q9NRW7	570 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	ELOVL2	Q9NXB9	296 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	MYO1A	Q9UBC5	1043 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	SNX10	Q9Y5X0	201 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	HS3ST4	Q9Y661	456 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	BZW2	Q9Y6E2	419 aa	Known RBP	10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	ITIH6	Q6UXX5	1313 aa		10.75	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	RALGAPA1	Q6GYQ0	2036 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	LAMA5	O15230	3695 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	C2CD4B	A6NLJ0	364 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	SIGLEC16	A6NMB1	481 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	C4orf47	A7E2U8	309 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	GFRA2	O00451	464 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	TIMM44	O43615	452 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	RTN2	O75298	545 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	LUC7L3	O95232	432 aa	Known RBP	10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	MOCS3	O95396	460 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	POLR2E	P19388	210 aa	Known RBP	10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	MPL	P40238	635 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	NOVA1	P51513	510 aa	Known RBP	10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	EIF4EBP2	Q13542	120 aa	Predicted RBP	10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	AUH	Q13825	339 aa	Known RBP	10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	EIF4H	Q15056	248 aa	Known RBP	10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	E2F5	Q15329	346 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	CRY1	Q16526	586 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	ARL13B	Q3SXY8	428 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	SH3PXD2A	Q5TCZ1	1133 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	MBLAC2	Q68D91	279 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	FBXL22	Q6P050	247 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	SERPINA13P	Q6UXR4	307 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	TMEM92	Q6UXU6	159 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	ARC	Q7LC44	396 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	TMC6	Q7Z403	805 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	VSTM4	Q8IW00	320 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	AHI1	Q8N157	1196 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	KCNV2	Q8TDN2	545 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	FAM172A	Q8WUF8	416 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	CYB5D2	Q8WUJ1	264 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	NT5C3B	Q969T7	300 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	TRIM11	Q96F44	468 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	PGAP3	Q96FM1	320 aa	Predicted RBP	10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	SYT11	Q9BT88	431 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	RBSN	Q9H1K0	784 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	DUSP15	Q9H1R2	295 aa	Predicted RBP	10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	DEF6	Q9H4E7	631 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	PARVA	Q9NVD7	372 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	ARHGEF38	Q9NXL2	777 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	CNOT8	Q9UFF9	292 aa	Known RBP	10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	EBF1	Q9UH73	591 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	ADAMTS1	Q9UHI8	967 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	PLA2G4C	Q9UP65	541 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	INVS	Q9Y283	1065 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	STARD13	Q9Y3M8	1113 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	RAD54B	Q9Y620	910 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	STON1	Q9Y6Q2	735 aa		10.74	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	SMG1	Q96Q15	3661 aa	Known RBP	10.73	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	10.73	□□□□□ -0.69
TRAPPC12-222	ENST00000493792		A0A1B0GVM2	712 aa		10.73	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	TMEM8B	A6NDV4	472 aa		10.73	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	TCAF2	A6NFQ2	919 aa		10.73	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	WASH3P	C4AMC7	463 aa		10.73	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	CCP110	O43303	1012 aa		10.73	□□□□□ -0.69
TRAPPC12-222	ENST00000493792	SYNCRIP	O60506	623 aa	Known RBP	10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms