RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 NAXDQ8IW45 347 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 FAM114A1Q8IWE2 563 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 CCAR2Q8N163 923 aaKnown RBP15.13■□□□□ 0.01
ATG4B-223ENST00000493618 C1orf216Q8TAB5 229 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 BIRC7Q96CA5 298 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 PRMT1Q99873 361 aaKnown RBP15.13■□□□□ 0.01
ATG4B-223ENST00000493618 TUBGCP2Q9BSJ2 902 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 ADAM33Q9BZ11 813 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 NUP62CLQ9H1M0 184 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 PABPC3Q9H361 631 aaKnown RBP15.13■□□□□ 0.01
ATG4B-223ENST00000493618 NDST4Q9H3R1 872 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 GAREM1Q9H706 876 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 SYNCQ9H7C4 482 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.13■□□□□ 0.01
ATG4B-223ENST00000493618 SERGEFQ9UGK8 458 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 SLC12A6Q9UHW9 1150 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-223ENST00000493618 NFE2L3Q9Y4A8 694 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 DOCK9Q9BZ29 2069 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 PTPRBP23467 1997 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 MID1O15344 667 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 DAB1O75553 588 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 VAV1P15498 845 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 ABCB4P21439 1286 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 CCR1P32246 355 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 MATKP42679 507 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 PSMD8P48556 350 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 RNASE9P60153 205 aaKnown RBP15.12■□□□□ 0.01
ATG4B-223ENST00000493618 ECT2LQ008S8 904 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 SLC6A3Q01959 620 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 ZBTB16Q05516 673 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 KCNMA1Q12791 1236 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 KCNJ12Q14500 433 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 HLA-BQ31612 363 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 C9orf64Q5T6V5 341 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 TAF3Q5VWG9 929 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 RNF219Q5W0B1 726 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-223ENST00000493618 OLFML1Q6UWY5 402 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 UNQ6494/PRO21346Q6UXR6 183 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 STK40Q8N2I9 435 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 IGSF8Q969P0 613 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 NOX5Q96PH1 765 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 ZDHHC5Q9C0B5 715 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 PDCL3Q9H2J4 239 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 SAMSN1Q9NSI8 373 aaKnown RBP15.12■□□□□ 0.01
ATG4B-223ENST00000493618 ASNSD1Q9NWL6 643 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 FBXL12Q9NXK8 326 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 KLK13Q9UKR3 277 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 NCKAP1Q9Y2A7 1128 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 FNDC3AQ9Y2H6 1198 aaKnown RBP15.12■□□□□ 0.01
ATG4B-223ENST00000493618 PCDHB9Q9Y5E1 797 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 FHOD1Q9Y613 1164 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 CACNA1GO43497 2377 aa15.12■□□□□ 0.01
ATG4B-223ENST00000493618 DOCK4Q8N1I0 1966 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 EDDM13A0A1B0GTR0 161 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 A0A1W2PP55 124 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 M0QYT0 321 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 KCNK3O14649 394 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 RNASEH1O60930 286 aaKnown RBP15.11■□□□□ 0.01
ATG4B-223ENST00000493618 RNASEH2AO75792 299 aaKnown RBP15.11■□□□□ 0.01
ATG4B-223ENST00000493618 PROS1P07225 676 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 GLI1P08151 1106 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 SRPRAP08240 638 aaKnown RBP15.11■□□□□ 0.01
ATG4B-223ENST00000493618 TFE3P19532 575 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-223ENST00000493618 SLC14A1Q13336 389 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 DRAP1Q14919 205 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-223ENST00000493618 TRIP6Q15654 476 aaKnown RBP15.11■□□□□ 0.01
ATG4B-223ENST00000493618 CST6Q15828 149 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 RABGAP1LQ5R372 815 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 OTUD1Q5VV17 481 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-223ENST00000493618 FBXL22Q6P050 247 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 C14orf80Q86SX3 495 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 FAM71AQ8IYT1 594 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 CHCHD4Q8N4Q1 142 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 SETD7Q8WTS6 366 aaKnown RBP15.11■□□□□ 0.01
ATG4B-223ENST00000493618 RPRD1AQ96P16 312 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-223ENST00000493618 PCED1AQ9H1Q7 454 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 NEUROG2Q9H2A3 272 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 SGK2Q9HBY8 427 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 TM9SF3Q9HD45 589 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 DACH1Q9UI36 760 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 VANGL2Q9ULK5 521 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 SNX11Q9Y5W9 270 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 SNX10Q9Y5X0 201 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 WDFY3Q8IZQ1 3526 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 ITIH6Q6UXX5 1313 aa15.11■□□□□ 0.01
ATG4B-223ENST00000493618 SPEGQ15772 3267 aa15.1■□□□□ 0.01
ATG4B-223ENST00000493618 PLXNB3Q9ULL4 1909 aa15.1■□□□□ 0.01
ATG4B-223ENST00000493618 USP24Q9UPU5 2620 aa15.1■□□□□ 0.01
ATG4B-223ENST00000493618 PLK4O00444 970 aa15.1■□□□□ 0.01
ATG4B-223ENST00000493618 PAGE1O75459 146 aa15.1■□□□□ 0.01
ATG4B-223ENST00000493618 CER1O95813 267 aa15.1■□□□□ 0.01
ATG4B-223ENST00000493618 C7P10643 843 aa15.1■□□□□ 0.01
ATG4B-223ENST00000493618 SLC2A3P11169 496 aa15.1■□□□□ 0.01
ATG4B-223ENST00000493618 ERCC5P28715 1186 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-223ENST00000493618 SLC8A1P32418 973 aa15.1■□□□□ 0.01
ATG4B-223ENST00000493618 AFF3P51826 1226 aaKnown RBP15.1■□□□□ 0.01
ATG4B-223ENST00000493618 AUHQ13825 339 aaKnown RBP15.1■□□□□ 0.01
ATG4B-223ENST00000493618 KIF19Q2TAC6 998 aa15.1■□□□□ 0.01
ATG4B-223ENST00000493618 C2CD6Q53TS8 623 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms