RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 VANGL1Q8TAA9 524 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 AKAP1Q92667 903 aaKnown RBP eCLIP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 C20orf96Q9NUD7 363 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 HCN4Q9Y3Q4 1203 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 CNTNAP5Q8WYK1 1306 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 TRAV6A0A075B6T7 132 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 IGKV6D-41A0A0C4DH26 115 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 RAB19A4D1S5 217 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 H0YIN7 160 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 DNAJB5O75953 348 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 S100A6P06703 90 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 FCER1AP12319 257 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 HSPA6P17066 643 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 RPL10P27635 214 aaKnown RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 UQCRC1P31930 480 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 OPRL1P41146 370 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 ALDH3B2P48448 385 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 COPAP53621 1224 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 ITGA8P53708 1063 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 MYL6P60660 151 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 ATP6V0D1P61421 351 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 CDKL1Q00532 357 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 CD83Q01151 205 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 UBAP2LQ14157 1087 aaKnown RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 ALFQ53S48 1182 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 OGFRL1Q5TC84 451 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 STYK1Q6J9G0 422 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 UNC5AQ6ZN44 842 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 BBS7Q8IWZ6 715 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 MAGEB6Q8N7X4 407 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 SLC39A13Q96H72 371 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 CEP19Q96LK0 163 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 WDR12Q9GZL7 423 aaKnown RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 NAA50Q9GZZ1 169 aaKnown RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 SEMA6AQ9H2E6 1030 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 C17orf75Q9HAS0 396 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 SAYSD1Q9NPB0 183 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 RIC8BQ9NVN3 520 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 POLR3BQ9NW08 1133 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-205ENST00000493587 SYBUQ9NX95 663 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 GGA3Q9NZ52 723 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 CPNE7Q9UBL6 633 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 SLC24A2Q9UI40 661 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 POMPQ9Y244 141 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 B3GNT3Q9Y2A9 372 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 ACTL7BQ9Y614 415 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 STON1Q9Y6Q2 735 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 MAU2Q9Y6X3 613 aa7.02□□□□□ -1.29
VPS13B-205ENST00000493587 TRPC5OSA6NMA1 111 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 HNRNPCL2B2RXH8 293 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 DEXIO95424 95 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 SERPINB2P05120 415 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 BGNP21810 368 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 SSTR3P32745 418 aaPredicted RBP7.01□□□□□ -1.29
VPS13B-205ENST00000493587 FLOT2Q14254 428 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 SEMA3AQ14563 771 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 ZMYND11Q15326 602 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 TOMM20Q15388 145 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 TAF5Q15542 800 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 FAM209BQ5JX69 171 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 KYAT3Q6YP21 454 aaKnown RBP7.01□□□□□ -1.29
VPS13B-205ENST00000493587 BTN2A1Q7KYR7 527 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 BTLAQ7Z6A9 289 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 ARMC8Q8IUR7 673 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 CPA6Q8N4T0 437 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 BEND7Q8N7W2 519 aaPredicted RBP7.01□□□□□ -1.29
VPS13B-205ENST00000493587 FANK1Q8TC84 345 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 NRBF2Q96F24 287 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 VCPIP1Q96JH7 1222 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 YME1L1Q96TA2 773 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 BTBD2Q9BX70 525 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 BBS2Q9BXC9 721 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 DCLK3Q9C098 648 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 OSGEPQ9NPF4 335 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 SENP1Q9P0U3 644 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 GMEB2Q9UKD1 530 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 ZSWIM8A7E2V4 1837 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 MICAL3Q7RTP6 2002 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 SYNGAP1Q96PV0 1343 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 APOL1O14791 398 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 SSX5O60225 188 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 PRDM1O75626 825 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 IFNA16P05015 189 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 NCF2P19878 526 aaPredicted RBP7.01□□□□□ -1.29
VPS13B-205ENST00000493587 ARNTP27540 789 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 FMO4P31512 558 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 TRIM23P36406 574 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 TOP3AQ13472 1001 aaPredicted RBP7.01□□□□□ -1.29
VPS13B-205ENST00000493587 GRAPQ13588 217 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 EARS2Q5JPH6 523 aaKnown RBP7.01□□□□□ -1.29
VPS13B-205ENST00000493587 C6orf10Q5SRN2 563 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 PDXDC2PQ6P474 469 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 PLEKHG7Q6ZR37 379 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 DENND5BQ6ZUT9 1274 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 EEPD1Q7L9B9 569 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 GSTA5Q7RTV2 222 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 FBXL6Q8N531 539 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 ZNF366Q8N895 744 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 TMEM35BQ8NCS4 154 aa7.01□□□□□ -1.29
VPS13B-205ENST00000493587 GRAPLQ8TC17 118 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 222 ms