RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 ANLNQ9NQW6 1124 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 ANGPTL2Q9UKU9 493 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 VANGL2Q9ULK5 521 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 SLC8A2Q9UPR5 921 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 SNX10Q9Y5X0 201 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 HS3ST4Q9Y661 456 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 CKAP5Q14008 2032 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 CHD6Q8TD26 2715 aa11.97□□□□□ -0.49
CTSA-209ENST00000493522 EML5Q05BV3 1969 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 SHROOM3Q8TF72 1996 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 GFRA2O00451 464 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 TRIM24O15164 1050 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 AXIN1O15169 862 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 RNF8O76064 485 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 EPN2O95208 641 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 KAT7O95251 611 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 TMEM253P0C7T8 217 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 ZNF806P0C7X5 589 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 SEC13P55735 322 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 GSDMDP57764 484 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 CDH18Q13634 790 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 AUHQ13825 339 aaKnown RBP11.96□□□□□ -0.49
CTSA-209ENST00000493522 PREPLQ4J6C6 727 aaPredicted RBP11.96□□□□□ -0.49
CTSA-209ENST00000493522 C10orf76Q5T2E6 689 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 CIR1Q86X95 450 aaPredicted RBP11.96□□□□□ -0.49
CTSA-209ENST00000493522 MFN1Q8IWA4 741 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 CCDC117Q8IWD4 279 aaPredicted RBP11.96□□□□□ -0.49
CTSA-209ENST00000493522 CCDC170Q8IYT3 715 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 CARNMT1Q8N4J0 409 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 TERB1Q8NA31 727 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 FNIP1Q8TF40 1166 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 CENPIQ92674 756 aaPredicted RBP11.96□□□□□ -0.49
CTSA-209ENST00000493522 MYEOVQ96EZ4 313 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 BTBD6Q96KE9 485 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 RPRD1AQ96P16 312 aaPredicted RBP11.96□□□□□ -0.49
CTSA-209ENST00000493522 PRMT1Q99873 361 aaKnown RBP11.96□□□□□ -0.49
CTSA-209ENST00000493522 LUC7LQ9NQ29 371 aaKnown RBP11.96□□□□□ -0.49
CTSA-209ENST00000493522 PCDHGA5Q9Y5G8 931 aa11.96□□□□□ -0.49
CTSA-209ENST00000493522 FRYQ5TBA9 3013 aa11.96□□□□□ -0.5
CTSA-209ENST00000493522 RALGAPA1Q6GYQ0 2036 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 I6L893 689 aaPredicted RBP11.95□□□□□ -0.5
CTSA-209ENST00000493522 RNF40O75150 1001 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 LUC7L3O95232 432 aaKnown RBP11.95□□□□□ -0.5
CTSA-209ENST00000493522 NDUFA10O95299 355 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 GRIA2P42262 883 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 MAGEA1P43355 309 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 PXNP49023 591 aaPredicted RBP11.95□□□□□ -0.5
CTSA-209ENST00000493522 IRAK1P51617 712 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 MESP2Q0VG99 397 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 SF3A2Q15428 464 aaKnown RBP11.95□□□□□ -0.5
CTSA-209ENST00000493522 EFHC2Q5JST6 749 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 TTC39BQ5VTQ0 682 aaPredicted RBP11.95□□□□□ -0.5
CTSA-209ENST00000493522 FBXL22Q6P050 247 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 LRRC31Q6UY01 552 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 NUDT18Q6ZVK8 323 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 ANKS1BQ7Z6G8 1248 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 SLFN11Q7Z7L1 901 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 C14orf80Q86SX3 495 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 SFTPA1Q8IWL2 248 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 PHTF2Q8N3S3 785 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 CAMKK1Q8N5S9 505 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 ANP32BQ92688 251 aaKnown RBP11.95□□□□□ -0.5
CTSA-209ENST00000493522 EZH1Q92800 747 aaPredicted RBP11.95□□□□□ -0.5
CTSA-209ENST00000493522 NTAN1Q96AB6 310 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 HAPLN3Q96S86 360 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 SLC2A11Q9BYW1 496 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 UVRAGQ9P2Y5 699 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 IP6K2Q9UHH9 426 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 CLEC4EQ9ULY5 219 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 EPN1Q9Y6I3 576 aaPredicted RBP11.95□□□□□ -0.5
CTSA-209ENST00000493522 WDFY3Q8IZQ1 3526 aa11.95□□□□□ -0.5
CTSA-209ENST00000493522 NUP205Q92621 2012 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 A0A1B0GVM2 712 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 TBC1D3BA6NDS4 549 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 TCAF2A6NFQ2 919 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 TMEM110-MUSTN1A8MSY1 372 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 EIF3CLB5ME19 914 aaKnown RBP11.94□□□□□ -0.5
CTSA-209ENST00000493522 E9PAM4 449 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 H0Y626 953 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 PRPSAP2O60256 369 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 LCA5LO95447 670 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 PMLP29590 882 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 HOXC13P31276 330 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 ADRA1BP35368 520 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 SSR1P43307 286 aaKnown RBP11.94□□□□□ -0.5
CTSA-209ENST00000493522 SCAPQ12770 1279 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 PIGHQ14442 188 aaPredicted RBP11.94□□□□□ -0.5
CTSA-209ENST00000493522 CCDC6Q16204 474 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 FBXO43Q4G163 708 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 MPP7Q5T2T1 576 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 STPG1Q5TH74 334 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 DAB2IPQ5VWQ8 1189 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 PKN3Q6P5Z2 889 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 RAD9BQ6WBX8 426 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 KBTBD6Q86V97 674 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 TMEM139Q8IV31 216 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 CCAR2Q8N163 923 aaKnown RBP11.94□□□□□ -0.5
CTSA-209ENST00000493522 ZNF557Q8N988 423 aaPredicted RBP11.94□□□□□ -0.5
CTSA-209ENST00000493522 ACRBPQ8NEB7 543 aa11.94□□□□□ -0.5
CTSA-209ENST00000493522 WFDC5Q8TCV5 224 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms