RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 LTFP02788 710 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 ASLP04424 464 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 VAV1P15498 845 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 EPHA8P29322 1005 aaPredicted RBP14.19□□□□□ -0.14
SAMM50-204ENST00000493161 PMS1P54277 932 aaKnown RBP14.19□□□□□ -0.14
SAMM50-204ENST00000493161 PPP2CBP62714 309 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 PPP2CAP67775 309 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 ARID5BQ14865 1188 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 DCAF6Q58WW2 860 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 NUGGCQ68CJ6 796 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 FBXL19Q6PCT2 694 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 SPATS2Q86XZ4 545 aaKnown RBP14.19□□□□□ -0.14
SAMM50-204ENST00000493161 KAT5Q92993 513 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 NXPE2Q96DL1 559 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 SERAC1Q96JX3 654 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 RPL10LQ96L21 214 aaKnown RBP14.19□□□□□ -0.14
SAMM50-204ENST00000493161 MIS12Q9H081 205 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 FZD4Q9ULV1 537 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 NAALADL1Q9UQQ1 740 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 ZDHHC9Q9Y397 364 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 AK5Q9Y6K8 562 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 TLR4O00206 839 aa14.18□□□□□ -0.14
SAMM50-204ENST00000493161 MOCS2O96007 188 aaPredicted RBP14.18□□□□□ -0.14
SAMM50-204ENST00000493161 HSP90AA1P07900 732 aaKnown RBP14.18□□□□□ -0.14
SAMM50-204ENST00000493161 BRD2P25440 801 aaKnown RBP14.18□□□□□ -0.14
SAMM50-204ENST00000493161 HNF1BP35680 557 aa14.18□□□□□ -0.14
SAMM50-204ENST00000493161 STK19P49842 368 aaPredicted RBP14.18□□□□□ -0.14
SAMM50-204ENST00000493161 CCR5P51681 352 aa14.18□□□□□ -0.14
SAMM50-204ENST00000493161 ADPRHP54922 357 aa14.18□□□□□ -0.14
SAMM50-204ENST00000493161 NXPH1P58417 271 aa14.18□□□□□ -0.14
SAMM50-204ENST00000493161 MS4A13Q5J8X5 152 aa14.18□□□□□ -0.14
SAMM50-204ENST00000493161 C6orf118Q5T5N4 469 aa14.18□□□□□ -0.14
SAMM50-204ENST00000493161 TMEM270Q6UE05 265 aa14.18□□□□□ -0.14
SAMM50-204ENST00000493161 KANSL1Q7Z3B3 1105 aa14.18□□□□□ -0.14
SAMM50-204ENST00000493161 OR14C36Q8NHC7 312 aa14.18□□□□□ -0.14
SAMM50-204ENST00000493161 DQX1Q8TE96 717 aaKnown RBP14.18□□□□□ -0.14
SAMM50-204ENST00000493161 IRGQQ8WZA9 623 aa14.18□□□□□ -0.14
SAMM50-204ENST00000493161 SLC39A7Q92504 469 aa14.18□□□□□ -0.14
SAMM50-204ENST00000493161 PTPRN2Q92932 1015 aa14.18□□□□□ -0.14
SAMM50-204ENST00000493161 AZIN2Q96A70 460 aa14.18□□□□□ -0.14
SAMM50-204ENST00000493161 CAAP1Q9H8G2 361 aa14.18□□□□□ -0.14
SAMM50-204ENST00000493161 GDF3Q9NR23 364 aa14.18□□□□□ -0.14
SAMM50-204ENST00000493161 ITIH6Q6UXX5 1313 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 KALRNO60229 2985 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 SHROOM3Q8TF72 1996 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 EDDM13A0A1B0GTR0 161 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 TARSL2A2RTX5 802 aaKnown RBP14.17□□□□□ -0.14
SAMM50-204ENST00000493161 M0QYV0 167 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 LUC7L3O95232 432 aaKnown RBP14.17□□□□□ -0.14
SAMM50-204ENST00000493161 C1SP09871 688 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 GOT1P17174 413 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 DRD3P35462 400 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 PRCPP42785 496 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 ECT2LQ008S8 904 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 C19orf57Q0VDD7 668 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 CDH18Q13634 790 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 RTP5Q14D33 572 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 SFMBT2Q5VUG0 894 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 SYPL2Q5VXT5 272 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 ANKRD40Q6AI12 368 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.17□□□□□ -0.14
SAMM50-204ENST00000493161 SND1Q7KZF4 910 aaKnown RBP eCLIP14.17□□□□□ -0.14
SAMM50-204ENST00000493161 LGI2Q8N0V4 545 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 KDM1BQ8NB78 822 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 SLC35C1Q96A29 364 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 SKA1Q96BD8 255 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 SLC39A13Q96H72 371 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 IRX2Q9BZI1 471 aaPredicted RBP14.17□□□□□ -0.14
SAMM50-204ENST00000493161 KIAA1257Q9ULG3 409 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 MYLKQ15746 1914 aa14.17□□□□□ -0.14
SAMM50-204ENST00000493161 NYNRINQ9P2P1 1898 aaKnown RBP14.16□□□□□ -0.14
SAMM50-204ENST00000493161 HELZ2Q9BYK8 2649 aaKnown RBP14.16□□□□□ -0.14
SAMM50-204ENST00000493161 TBC1D3DA0A087WVF3 549 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 TBC1D3IA0A087WXS9 549 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 TBC1D3EA0A087X179 549 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 TBC1D3KA0A087X1G2 549 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 TRIM49BA6NDI0 452 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 TBC1D3FA6NER0 549 aaPredicted RBP14.16□□□□□ -0.14
SAMM50-204ENST00000493161 TBC1D3LB9A6J9 549 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 ATXN7O15265 892 aaPredicted RBP14.16□□□□□ -0.14
SAMM50-204ENST00000493161 LATO43561 262 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 SDC3O75056 442 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 RTN2O75298 545 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 ZNF202O95125 648 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 IL1BP01584 269 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 SRPRAP08240 638 aaKnown RBP14.16□□□□□ -0.14
SAMM50-204ENST00000493161 PAEPP09466 180 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 TBC1D3HP0C7X1 549 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 MZF1P28698 734 aaPredicted RBP14.16□□□□□ -0.14
SAMM50-204ENST00000493161 MAT2AP31153 395 aaKnown RBP14.16□□□□□ -0.14
SAMM50-204ENST00000493161 YWHAEP62258 255 aaKnown RBP14.16□□□□□ -0.14
SAMM50-204ENST00000493161 PNOCQ13519 176 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 CNGA2Q16280 664 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 RAP1GAP2Q684P5 730 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 TBC1D3GQ6DHY5 549 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 TBC1D3CQ6IPX1 549 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 TAC4Q86UU9 113 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 CIR1Q86X95 450 aaPredicted RBP14.16□□□□□ -0.14
SAMM50-204ENST00000493161 HSCBQ8IWL3 235 aa14.16□□□□□ -0.14
SAMM50-204ENST00000493161 TBC1D3Q8IZP1 549 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms