RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 MARK4Q96L34 752 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 GPR78Q96P69 363 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 PYM1Q9BRP8 204 aaKnown RBP3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 TMEM79Q9BSE2 394 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 RMI1Q9H9A7 625 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 CHODLQ9H9P2 273 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 SLC22A11Q9NSA0 550 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 TMEM160Q9NX00 188 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 PDP2Q9P2J9 529 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 PGAP2Q9UHJ9 254 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 DNAJC16Q9Y2G8 782 aa3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 COPG1Q9Y678 874 aaKnown RBP3.26□□□□□ -1.89
HMGB1P30-201ENST00000492455 RRN3P2A6NIE6 340 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 POC1B-GALNT4F8VUJ3 575 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 AGR2O95994 175 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 TUBB4AP04350 444 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 PYGLP06737 847 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 POLBP06746 335 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 CYP2A6P11509 494 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 CHN1P15882 459 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 CNTFP26441 200 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 GRK5P34947 590 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 MAPK9P45984 424 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 SOX2P48431 317 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 AARSP49588 968 aaKnown RBP eCLIP3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 RCAN1P53805 252 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 RNASELQ05823 741 aaKnown RBP3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 HYAL1Q12794 435 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 CBFBQ13951 182 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 KPNB1Q14974 876 aaKnown RBP3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 CNGA3Q16281 694 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 ZNF569Q5MCW4 686 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 PRAMEF17Q5VTA0 474 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 WDR93Q6P2C0 686 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 TMEM65Q6PI78 240 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 ZNF474Q6S9Z5 364 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 SLC39A5Q6ZMH5 540 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 ZNF66Q6ZN08 573 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 BBS12Q6ZW61 710 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 MEPCEQ7L2J0 689 aaKnown RBP3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 GALNT4Q8N4A0 578 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 LINS1Q8NG48 757 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 CEP70Q8NHQ1 597 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 ADAMTS18Q8TE60 1221 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 GOLGA1Q92805 767 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 ATP2A3Q93084 1043 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 HIC2Q96JB3 615 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 ZSCAN31Q96LW9 406 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 COG8Q96MW5 612 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 FYTTD1Q96QD9 318 aaKnown RBP3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 TM2D2Q9BX73 214 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 QTRT1Q9BXR0 403 aaKnown RBP3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 SPRTNQ9H040 489 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 RIC8AQ9NPQ8 531 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 TLR8Q9NR97 1041 aaKnown RBP3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 ASNSD1Q9NWL6 643 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 GTF2A1LQ9UNN4 478 aa3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 SIRT4Q9Y6E7 314 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P30-201ENST00000492455 TBC1D3DA0A087WVF3 549 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 TBC1D3IA0A087WXS9 549 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 TBC1D3EA0A087X179 549 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 TBC1D3KA0A087X1G2 549 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 A0A1B0GVC2 190 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 TBC1D3BA6NDS4 549 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 TBC1D3FA6NER0 549 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 NPIPB13A6NJU9 1138 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 C3orf70A6NLC5 250 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 NPIPB5A8MRT5 1133 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 C17orf100A8MU93 164 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 KCNU1A8MYU2 1149 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 TBC1D3LB9A6J9 549 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 NPIPB4C9JG80 1138 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 PRRT4C9JH25 899 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 GRM8O00222 908 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 KRT86O43790 486 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 CNTN5O94779 1100 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 CHRM5P08912 532 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 TBC1D3HP0C7X1 549 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 RXRAP19793 462 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 PRPH2P23942 346 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 AVPR2P30518 371 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 SLC8A1P32418 973 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 VPS41P49754 854 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 B4GALNT1Q00973 533 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 KRT81Q14533 505 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 HSP90AB4PQ58FF6 505 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 MAP3K21Q5TCX8 1036 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 TBC1D3GQ6DHY5 549 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 TBC1D3CQ6IPX1 549 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 RANBP10Q6VN20 620 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 SYNE3Q6ZMZ3 975 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 USP43Q70EL4 1123 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 MDGA2Q7Z553 956 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 CNGA4Q8IV77 575 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 TBC1D3Q8IZP1 549 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 PTGR2Q8N8N7 351 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 PNLDC1Q8NA58 520 aaKnown RBP3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 C8orf58Q8NAV2 365 aa3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 WIPF2Q8TF74 440 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P30-201ENST00000492455 CELF1Q92879 486 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms