RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 XRCC4Q13426 336 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 COL19A1Q14993 1142 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 CTC1Q2NKJ3 1217 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 AFMIDQ63HM1 303 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 CCDC70Q6NSX1 233 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 RFWD3Q6PCD5 774 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 LRRC31Q6UY01 552 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 HTR3DQ70Z44 454 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 B4GALNT4Q76KP1 1039 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 ZC3H18Q86VM9 953 aaKnown RBP15.32■□□□□ 0.04
COPS7B-222ENST00000492423 CIR1Q86X95 450 aaPredicted RBP15.32■□□□□ 0.04
COPS7B-222ENST00000492423 ARHGAP12Q8IWW6 846 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 CCDC33Q8N5R6 958 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 ALLCQ8N6M5 410 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 PDCD7Q8N8D1 485 aaKnown RBP15.32■□□□□ 0.04
COPS7B-222ENST00000492423 ATL2Q8NHH9 583 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 GRK7Q8WTQ7 553 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 LRCH3Q96II8 777 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 CCDC114Q96M63 670 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 QKIQ96PU8 341 aaKnown RBP eCLIP15.32■□□□□ 0.04
COPS7B-222ENST00000492423 ZYG11BQ9C0D3 744 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 NDFIP2Q9NV92 336 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 TMEM248Q9NWD8 314 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 RAD54BQ9Y620 910 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 COL4A3Q01955 1670 aa15.32■□□□□ 0.04
COPS7B-222ENST00000492423 H7C0C1 242 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 TRDMT1O14717 391 aaKnown RBP15.31■□□□□ 0.04
COPS7B-222ENST00000492423 VAV1P15498 845 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 TCF3P15923 654 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 HOXB8P17481 243 aaPredicted RBP15.31■□□□□ 0.04
COPS7B-222ENST00000492423 SERPINB6P35237 376 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 ATP5OP48047 213 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 GDF10P55107 478 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 DLX2Q07687 328 aaPredicted RBP15.31■□□□□ 0.04
COPS7B-222ENST00000492423 GALNT2Q10471 571 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 PTK6Q13882 451 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 ZNF77Q15935 545 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 ADGRF1Q5T601 910 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 MAATS1Q7Z4T9 603 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 DDX42Q86XP3 938 aaKnown RBP eCLIP15.31■□□□□ 0.04
COPS7B-222ENST00000492423 NPAS3Q8IXF0 933 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 GLIS1Q8NBF1 620 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 SH3RF2Q8TEC5 729 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 LRRN4Q8WUT4 740 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 RPRD1AQ96P16 312 aaPredicted RBP15.31■□□□□ 0.04
COPS7B-222ENST00000492423 TMEM121Q9BTD3 319 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 S1PR5Q9H228 398 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 NOL6Q9H6R4 1146 aaKnown RBP15.31■□□□□ 0.04
COPS7B-222ENST00000492423 LSM7Q9UK45 103 aaKnown RBP15.31■□□□□ 0.04
COPS7B-222ENST00000492423 ZNF148Q9UQR1 794 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 SH3BP1Q9Y3L3 701 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 CHD7Q9P2D1 2997 aa15.31■□□□□ 0.04
COPS7B-222ENST00000492423 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.3■□□□□ 0.04
COPS7B-222ENST00000492423 BCLAF3A2AJT9 711 aaKnown RBP15.3■□□□□ 0.04
COPS7B-222ENST00000492423 FSHRP23945 695 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 WEE1P30291 646 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 AVPR1AP37288 418 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 RPS24P62847 133 aaKnown RBP15.3■□□□□ 0.04
COPS7B-222ENST00000492423 PRKD1Q15139 912 aaPredicted RBP15.3■□□□□ 0.04
COPS7B-222ENST00000492423 SLC45A4Q5BKX6 768 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 DUPD1Q68J44 220 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 DARS2Q6PI48 645 aaKnown RBP15.3■□□□□ 0.04
COPS7B-222ENST00000492423 SYDE1Q6ZW31 735 aaPredicted RBP15.3■□□□□ 0.04
COPS7B-222ENST00000492423 PRUNE1Q86TP1 453 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 CDKL3Q8IVW4 592 aaPredicted RBP15.3■□□□□ 0.04
COPS7B-222ENST00000492423 BBS7Q8IWZ6 715 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 CPXM2Q8N436 756 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 LZTR1Q8N653 840 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 CASKIN2Q8WXE0 1202 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 SEC14L1Q92503 715 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 RUBCNQ92622 972 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 MARVELD3Q96A59 401 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 P2RY11Q96G91 374 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 CELF6Q96J87 481 aaKnown RBP15.3■□□□□ 0.04
COPS7B-222ENST00000492423 DDX50Q9BQ39 737 aaKnown RBP15.3■□□□□ 0.04
COPS7B-222ENST00000492423 HINFPQ9BQA5 517 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 PARD6BQ9BYG5 372 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 USP29Q9HBJ7 922 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 GDF3Q9NR23 364 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 TDP1Q9NUW8 608 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 RAB21Q9UL25 225 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 ZNF510Q9Y2H8 683 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 ZFP37Q9Y6Q3 630 aaPredicted RBP15.3■□□□□ 0.04
COPS7B-222ENST00000492423 LAMA3Q16787 3333 aa15.3■□□□□ 0.04
COPS7B-222ENST00000492423 E2F8A0AVK6 867 aa15.29■□□□□ 0.04
COPS7B-222ENST00000492423 ESYT3A0FGR9 886 aa15.29■□□□□ 0.04
COPS7B-222ENST00000492423 CFAP69A5D8W1 941 aa15.29■□□□□ 0.04
COPS7B-222ENST00000492423 HACD1B0YJ81 288 aa15.29■□□□□ 0.04
COPS7B-222ENST00000492423 TSPAN3O60637 253 aa15.29■□□□□ 0.04
COPS7B-222ENST00000492423 GAS8O95995 478 aa15.29■□□□□ 0.04
COPS7B-222ENST00000492423 ETS1P14921 441 aa15.29■□□□□ 0.04
COPS7B-222ENST00000492423 RBL1P28749 1068 aa15.29■□□□□ 0.04
COPS7B-222ENST00000492423 LTBRP36941 435 aa15.29■□□□□ 0.04
COPS7B-222ENST00000492423 MAPKAPK2P49137 400 aa15.29■□□□□ 0.04
COPS7B-222ENST00000492423 VSNL1P62760 191 aa15.29■□□□□ 0.04
COPS7B-222ENST00000492423 GUCY2DQ02846 1103 aa15.29■□□□□ 0.04
COPS7B-222ENST00000492423 LMNB2Q03252 620 aa15.29■□□□□ 0.04
COPS7B-222ENST00000492423 CBX2Q14781 532 aaPredicted RBP15.29■□□□□ 0.04
COPS7B-222ENST00000492423 PDK1Q15118 436 aa15.29■□□□□ 0.04
COPS7B-222ENST00000492423 TRADDQ15628 312 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms