RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 NUGGCQ68CJ6 796 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 OR6B2Q6IFH4 312 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 CXorf57Q6NSI4 855 aaKnown RBP9.21□□□□□ -0.94
HDAC3-211ENST00000491581 KDM7AQ6ZMT4 941 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 TMEM110Q86TL2 294 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 METTL3Q86U44 580 aaKnown RBP9.21□□□□□ -0.94
HDAC3-211ENST00000491581 GATAD2AQ86YP4 633 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 CCAR2Q8N163 923 aaKnown RBP9.21□□□□□ -0.94
HDAC3-211ENST00000491581 HJURPQ8NCD3 748 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-211ENST00000491581 FIBINQ8TAL6 211 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 SETD7Q8WTS6 366 aaKnown RBP9.21□□□□□ -0.94
HDAC3-211ENST00000491581 SHC3Q92529 594 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 PTPRN2Q92932 1015 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 PPP1R13BQ96KQ4 1090 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 FAM129BQ96TA1 746 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 NUP58Q9BVL2 599 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 FAM124BQ9H5Z6 455 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-211ENST00000491581 FAM204AQ9H8W3 233 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 DDIT4Q9NX09 232 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 TOR4AQ9NXH8 423 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 APEX2Q9UBZ4 518 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 SARDHQ9UL12 918 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 VANGL2Q9ULK5 521 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 PLA2G4CQ9UP65 541 aa9.21□□□□□ -0.94
HDAC3-211ENST00000491581 CNOT1A5YKK6 2376 aaKnown RBP9.21□□□□□ -0.94
HDAC3-211ENST00000491581 CFAP47Q6ZTR5 3102 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 KCNU1A8MYU2 1149 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 H0Y8X5 98 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 K7ERQ8 282 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 EPHB6O15197 1021 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 BNIP3LO60238 219 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 CBFA2T3O75081 653 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 RNASEH2AO75792 299 aaKnown RBP9.2□□□□□ -0.94
HDAC3-211ENST00000491581 FBXO21O94952 628 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 ADCY5O95622 1261 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 LATS1O95835 1130 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 DNTTP04053 509 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 FTH1P19P0C7X4 201 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 GALCP54803 685 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 UBE2HP62256 183 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 CETN1Q12798 172 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 STILQ15468 1287 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 TRIP6Q15654 476 aaKnown RBP9.2□□□□□ -0.94
HDAC3-211ENST00000491581 CST6Q15828 149 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 EXOC3L4Q17RC7 722 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 ALFQ53S48 1182 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 WDR45BQ5MNZ6 344 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 SYCP2LQ5T4T6 812 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 FBXL22Q6P050 247 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 NCEH1Q6PIU2 408 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 OLFML1Q6UWY5 402 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 GBP6Q6ZN66 633 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 UNC45BQ8IWX7 931 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 CEP76Q8TAP6 659 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 GANCQ8TET4 914 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 WFIKKN2Q8TEU8 576 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 SLC20A1Q8WUM9 679 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 GOLGA1Q92805 767 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 KLK6Q92876 244 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 FOXJ1Q92949 421 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 TTC17Q96AE7 1141 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 ALG14Q96F25 216 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 SERPINB11Q96P15 392 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 MYOCQ99972 504 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 SIK2Q9H0K1 926 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 RSPH9Q9H1X1 276 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-211ENST00000491581 PABPC3Q9H361 631 aaKnown RBP9.2□□□□□ -0.94
HDAC3-211ENST00000491581 CLSTN2Q9H4D0 955 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 POPDC2Q9HBU9 364 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 TM7SF3Q9NS93 570 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 PIGVQ9NUD9 493 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 FBXL12Q9NXK8 326 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 TAB2Q9NYJ8 693 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 PCOLCE2Q9UKZ9 415 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 CEP83Q9Y592 693 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 HS3ST4Q9Y661 456 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 PCNX2A6NKB5 2137 aa9.2□□□□□ -0.94
HDAC3-211ENST00000491581 CHD8Q9HCK8 2581 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 CACNA1EQ15878 2313 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 GOLGA8SH3BPF8 625 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 M0QYT0 321 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 TIMM44O43615 452 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 SNAP91O60641 907 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 RTN2O75298 545 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 PAGE1O75459 146 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 ENDOD1O94919 500 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 GNA14O95837 355 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 MT-CO1P00395 513 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 APOEP02649 317 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 ATP5BP06576 529 aaKnown RBP9.19□□□□□ -0.94
HDAC3-211ENST00000491581 SYPP08247 313 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 MMEP08473 750 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 PRKCSHP14314 528 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-211ENST00000491581 MAT2AP31153 395 aaKnown RBP9.19□□□□□ -0.94
HDAC3-211ENST00000491581 SLC8A1P32418 973 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 HOXD12P35452 270 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 DRD3P35462 400 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 PPP1R2P41236 205 aa9.19□□□□□ -0.94
HDAC3-211ENST00000491581 AUHQ13825 339 aaKnown RBP9.19□□□□□ -0.94
HDAC3-211ENST00000491581 RAPGEF1Q13905 1077 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms