RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 POLR1BQ9H9Y6 1135 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 SYBUQ9NX95 663 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 TSPAN16Q9UKR8 245 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 CROCCQ5TZA2 2017 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 TK2O00142 265 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 ZSCAN9O15535 394 aaPredicted RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 CCDC166P0CW27 439 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 HDCP19113 662 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 ABCD1P33897 745 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 GP5P40197 560 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 YAP1P46937 504 aaKnown RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 GRIA4P48058 902 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 SLC25A11Q02978 314 aaKnown RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 STILQ15468 1287 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 NCAPG2Q86XI2 1143 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 ZNF276Q8N554 614 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 UBR7Q8N806 425 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 GFM2Q969S9 779 aaKnown RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 PIWIL1Q96J94 861 aaKnown RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 GJD4Q96KN9 370 aaPredicted RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 CDH19Q9H159 772 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 SNX25Q9H3E2 840 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 GGA3Q9NZ52 723 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 AP4E1Q9UPM8 1137 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 PCDHA11Q9Y5I1 949 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 GOLGB1Q14789 3259 aaKnown RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 PDLIM1O00151 329 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 VILLO15195 856 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 OGTO15294 1046 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 CCNT2O60583 730 aaKnown RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 ENTPD3O75355 529 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 OATP04181 439 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 PTPN1P18031 435 aaKnown RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 HSPA13P48723 471 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 PCYT1AP49585 367 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 NDST1P52848 882 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 HMGCS2P54868 508 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 TGFB2P61812 414 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 TSPY1Q01534 308 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 TBCELQ5QJ74 424 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 CES4AQ5XG92 561 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 RNF111Q6ZNA4 994 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 XYLT1Q86Y38 959 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 SIX6OS1Q8N1H7 587 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 WDTC1Q8N5D0 677 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 HPDLQ96IR7 371 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 WNK4Q96J92 1243 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 HAPLN3Q96S86 360 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 PEBP4Q96S96 227 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 AGAP2Q99490 1192 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 SEPHS2Q99611 448 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 GATA5Q9BWX5 397 aaPredicted RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 IDI2Q9BXS1 227 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 KLHL25Q9H0H3 589 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 PLGRKTQ9HBL7 147 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 DNAJB4Q9UDY4 337 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 SF3B1O75533 1304 aaKnown RBP eCLIP10.03□□□□□ -0.8
ERCC3-208ENST00000491292 TMEM233B4DJY2 109 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 RNF103O00237 685 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 PEX10O60683 326 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 GMNNO75496 209 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 LTFP02788 710 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 FGF3P11487 239 aaPredicted RBP10.03□□□□□ -0.8
ERCC3-208ENST00000491292 MTTPP55157 894 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 PSME3P61289 254 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 KCNJ11Q14654 390 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 OGFOD2Q6N063 350 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 DDIASQ8IXT1 998 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 PLD6Q8N2A8 252 aaKnown RBP10.03□□□□□ -0.8
ERCC3-208ENST00000491292 TMCO5AQ8N6Q1 288 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 METTL25Q8N6Q8 603 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 MAPK15Q8TD08 544 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 MZB1Q8WU39 189 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 TMEM176AQ96HP8 235 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 VPS50Q96JG6 964 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 SLC39A3Q9BRY0 314 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 RTKNQ9BST9 563 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 MED10Q9BTT4 135 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 FRMD8P1Q9BZ68 369 aaPredicted RBP10.03□□□□□ -0.8
ERCC3-208ENST00000491292 DRC3Q9H069 523 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 STK39Q9UEW8 545 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 GJA3Q9Y6H8 435 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 KLF11O14901 512 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 B4GALT5O43286 388 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 ZBTB11O95625 1053 aaPredicted RBP10.03□□□□□ -0.8
ERCC3-208ENST00000491292 APBA3O96018 575 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 SLC4A1P02730 911 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 CCDC130P13994 396 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 SLC5A2P31639 672 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 CPOXP36551 454 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 CLCN3P51790 818 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 MYBPC1Q00872 1141 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 MS4A2Q01362 244 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 BFSP2Q13515 415 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 HSF5Q4G112 596 aaPredicted RBP10.03□□□□□ -0.8
ERCC3-208ENST00000491292 DCAF6Q58WW2 860 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 ARL13AQ5H913 290 aaPredicted RBP10.03□□□□□ -0.8
ERCC3-208ENST00000491292 ATF7IP2Q5U623 682 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 MBLAC2Q68D91 279 aa10.03□□□□□ -0.8
ERCC3-208ENST00000491292 TAS1R3Q7RTX0 852 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms