RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 PRMT1Q99873 361 aaKnown RBP11.27□□□□□ -0.61
VARS2-210ENST00000490699 EBF3Q9H4W6 596 aa11.27□□□□□ -0.61
VARS2-210ENST00000490699 HOMER3Q9NSC5 361 aa11.27□□□□□ -0.61
VARS2-210ENST00000490699 CWC15Q9P013 229 aaKnown RBP11.27□□□□□ -0.61
VARS2-210ENST00000490699 HPCAL4Q9UM19 191 aa11.27□□□□□ -0.61
VARS2-210ENST00000490699 SNX10Q9Y5X0 201 aa11.27□□□□□ -0.61
VARS2-210ENST00000490699 RAD54BQ9Y620 910 aa11.27□□□□□ -0.61
VARS2-210ENST00000490699 CDH23Q9H251 3354 aa11.27□□□□□ -0.61
VARS2-210ENST00000490699 DOCK8Q8NF50 2099 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 IGLV3-10A0A075B6K4 115 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 hCG_1818297A0A087WSY0 165 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 ARHGAP42A6NI28 874 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 DRGXA6NNA5 263 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 FAM72CH0Y354 149 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 TRDMT1O14717 391 aaKnown RBP11.26□□□□□ -0.61
VARS2-210ENST00000490699 PPP1R12AO14974 1030 aaPredicted RBP11.26□□□□□ -0.61
VARS2-210ENST00000490699 NCAM2O15394 837 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 GREM1O60565 184 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 CST8O60676 142 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 RAMP2O60895 175 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 NEBLO76041 1014 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 LUC7L3O95232 432 aaKnown RBP11.26□□□□□ -0.61
VARS2-210ENST00000490699 FGGP02679 453 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 RHOCP08134 193 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 TYRP14679 529 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 ERCC2P18074 760 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 MX2P20592 715 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 HOXC13P31276 330 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 NR2C2P49116 596 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 DYNLT1P63172 113 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 SEMA3BQ13214 749 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 TDGQ13569 410 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 RUNX3Q13761 415 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 DHCR24Q15392 516 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 LY6G5CQ5SRR4 150 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 FAM72AQ5TYM5 149 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 MANEALQ5VSG8 457 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 FAM72DQ6L9T8 149 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 ZNF783Q6ZMS7 281 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 TFAP2DQ7Z6R9 452 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 SETD3Q86TU7 594 aaPredicted RBP11.26□□□□□ -0.61
VARS2-210ENST00000490699 FAM72BQ86X60 149 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 ADGRG2Q8IZP9 1017 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 CFAP52Q8N1V2 620 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 NSMCE1Q8WV22 266 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 TSC1Q92574 1164 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 WBP2Q969T9 261 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 RSPRY1Q96DX4 576 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 MSANTD3Q96H12 275 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 SLC2A11Q9BYW1 496 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 FRMD8P1Q9BZ68 369 aaPredicted RBP11.26□□□□□ -0.61
VARS2-210ENST00000490699 MUC3BQ9H195 1237 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 ECT2Q9H8V3 914 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 KCNK12Q9HB15 430 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 ANLNQ9NQW6 1124 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 ARHGEF4Q9NR80 690 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 TMEM248Q9NWD8 314 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 MARK1Q9P0L2 795 aa11.26□□□□□ -0.61
VARS2-210ENST00000490699 KIAA1522Q9P206 1035 aaPredicted RBP11.26□□□□□ -0.61
VARS2-210ENST00000490699 BRWD1Q9NSI6 2320 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 WASH4PA8MWX3 477 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 LOC730098B7Z3J9 87 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 MCF2LO15068 1137 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 HOXC11O43248 304 aaPredicted RBP11.25□□□□□ -0.61
VARS2-210ENST00000490699 CYP17A1P05093 508 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 CD48P09326 243 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 CHRM1P11229 460 aaPredicted RBP11.25□□□□□ -0.61
VARS2-210ENST00000490699 KRT10P13645 584 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 AMPD1P23109 780 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 ARSEP51690 589 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 NDST2P52849 883 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 YBEYP58557 167 aaPredicted RBP11.25□□□□□ -0.61
VARS2-210ENST00000490699 RPS24P62847 133 aaKnown RBP11.25□□□□□ -0.61
VARS2-210ENST00000490699 SLC12A1Q13621 1099 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 DPYSQ14117 519 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 PDK1Q15118 436 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 PARP15Q460N3 678 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 C5orf22Q49AR2 442 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 TRIM68Q6AZZ1 485 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 GRAMD4Q6IC98 578 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 BBS12Q6ZW61 710 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 C14orf80Q86SX3 495 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 SLC13A5Q86YT5 568 aaPredicted RBP11.25□□□□□ -0.61
VARS2-210ENST00000490699 LRRC49Q8IUZ0 686 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 MNS1Q8NEH6 495 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 ACTRT1Q8TDG2 376 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 IGSF8Q969P0 613 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 FAF2Q96CS3 445 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 ZFYVE19Q96K21 471 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 CAPZA3Q96KX2 299 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 PRICKLE1Q96MT3 831 aaPredicted RBP11.25□□□□□ -0.61
VARS2-210ENST00000490699 ASB2Q96Q27 587 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 FAM83CQ9BQN1 747 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 HEMGNQ9BXL5 484 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 LINC00597Q9H2U6 94 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 C8orf33Q9H7E9 229 aaPredicted RBP11.25□□□□□ -0.61
VARS2-210ENST00000490699 PRDM6Q9NQX0 595 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 DNAJC17Q9NVM6 304 aaKnown RBP11.25□□□□□ -0.61
VARS2-210ENST00000490699 MPP6Q9NZW5 540 aa11.25□□□□□ -0.61
VARS2-210ENST00000490699 DEC1Q9P2X7 70 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms