RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 DVL3Q92997 716 aaPredicted RBP5.04□□□□□ -1.6
CSTF1-205ENST00000490539 C8orf49Q96NF6 230 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 ZNF558Q96NG5 402 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 PLIN2Q99541 437 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 TMEM117Q9H0C3 514 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 CSRNP2Q9H175 543 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 HSD3B7Q9H2F3 369 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 PRDM12Q9H4Q4 367 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 MAGEF1Q9HAY2 307 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 IFT122Q9HBG6 1241 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 PARVGQ9HBI0 331 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 TOPORSQ9NS56 1045 aaPredicted RBP5.04□□□□□ -1.6
CSTF1-205ENST00000490539 AGPAT5Q9NUQ2 364 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 ZNF446Q9NWS9 450 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 CALCOCO1Q9P1Z2 691 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 SEL1LQ9UBV2 794 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.04□□□□□ -1.6
CSTF1-205ENST00000490539 MTUS1Q9ULD2 1270 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 OAZ3Q9UMX2 235 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 EXOC7Q9UPT5 735 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 PCDHB2Q9Y5E7 798 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 V9GYY5 206 aaPredicted RBP5.04□□□□□ -1.6
CSTF1-205ENST00000490539 SCN5AQ14524 2016 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 DMXL1Q9Y485 3027 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 TET1Q8NFU7 2136 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 A0A1B0GUA9 196 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 LINC01553A4QN01 128 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 PP2D1A8MPX8 630 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 ZNF891A8MT65 544 aaPredicted RBP5.03□□□□□ -1.6
CSTF1-205ENST00000490539 ACKR2O00590 384 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 HNRNPDLO14979 420 aaKnown RBP5.03□□□□□ -1.6
CSTF1-205ENST00000490539 GPR42O15529 346 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 CLDN3O15551 220 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 ZNF623O75123 536 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 CSDE1O75534 798 aaKnown RBP5.03□□□□□ -1.6
CSTF1-205ENST00000490539 ZRANB2O95218 330 aaKnown RBP eCLIP5.03□□□□□ -1.6
CSTF1-205ENST00000490539 SERPINC1P01008 464 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 ALDH2P05091 517 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 PRKCBP05771 671 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 PNMA6AP0CW24 399 aaPredicted RBP5.03□□□□□ -1.6
CSTF1-205ENST00000490539 ATP1A3P13637 1013 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 IDEP14735 1019 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 MYOGP15173 224 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 FGFR4P22455 802 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 GLRA2P23416 452 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 CA8P35219 290 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 BMPR1AP36894 532 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 NPTX2P47972 431 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 LSSP48449 732 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 LIG4P49917 911 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 ERVK-21P61565 698 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 FAM189BP81408 668 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 UBE3AQ05086 875 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 MBTD1Q05BQ5 628 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 KRTAP1-1Q07627 177 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 TBX2Q13207 712 aaPredicted RBP5.03□□□□□ -1.6
CSTF1-205ENST00000490539 DRP2Q13474 957 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 GPM6BQ13491 265 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 ALCAMQ13740 583 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 KARSQ15046 597 aaKnown RBP5.03□□□□□ -1.6
CSTF1-205ENST00000490539 MAN2A1Q16706 1144 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 FAM187BQ17R55 369 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 RNF151Q2KHN1 245 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 TMEM119Q4V9L6 283 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 EPC2Q52LR7 807 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 ARHGAP29Q52LW3 1261 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 NOMO2Q5JPE7 1267 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 CT47A1Q5JQC4 288 aaPredicted RBP5.03□□□□□ -1.6
CSTF1-205ENST00000490539 ATF7IP2Q5U623 682 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 RINT1Q6NUQ1 792 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 SHC4Q6S5L8 630 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 TMCO3Q6UWJ1 677 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 ESPNLQ6ZVH7 1005 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 C1orf186Q6ZWK4 172 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 LARP4Q71RC2 724 aaKnown RBP eCLIP5.03□□□□□ -1.6
CSTF1-205ENST00000490539 BMP8AQ7Z5Y6 402 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 TMEM139Q8IV31 216 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 SYCP3Q8IZU3 236 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 PDILTQ8N807 584 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 MNS1Q8NEH6 495 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 OR5AN1Q8NGI8 311 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 USP7Q93009 1102 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 P2RX5Q93086 422 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 EPSTI1Q96J88 318 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 CEP89Q96ST8 783 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 UBXN6Q9BZV1 441 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 LMAN2LQ9H0V9 348 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 NELFAQ9H3P2 528 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 MRPL44Q9H9J2 332 aaKnown RBP5.03□□□□□ -1.6
CSTF1-205ENST00000490539 CERS4Q9HA82 394 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 RSAD1Q9HA92 442 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 XPNPEP1Q9NQW7 623 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 SPG21Q9NZD8 308 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 ST6GALNAC2Q9UJ37 374 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 FBXO2Q9UK22 296 aaPredicted RBP5.03□□□□□ -1.6
CSTF1-205ENST00000490539 ZFR2Q9UPR6 939 aaKnown RBP5.03□□□□□ -1.6
CSTF1-205ENST00000490539 FAM50BQ9Y247 325 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 SSX2IPQ9Y2D8 614 aa5.03□□□□□ -1.6
CSTF1-205ENST00000490539 TTC3P53804 2025 aa5.02□□□□□ -1.61
CSTF1-205ENST00000490539 MICAL3Q7RTP6 2002 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms