RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 MLLT3P42568 568 aaPredicted RBP14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 NDST1P52848 882 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 METAP1P53582 386 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 ST8SIA6P61647 398 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 KCNMA1Q12791 1236 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 SNRNP35Q16560 246 aaKnown RBP14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 BMT2Q1RMZ1 405 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 ZNF699Q32M78 642 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 GUSBP11Q6P575 273 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 CRYBG2Q8N1P7 616 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 HTR3CQ8WXA8 447 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 LIN37Q96GY3 246 aaPredicted RBP14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 MRGPRX3Q96LB0 322 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 MYOCQ99972 504 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 USP29Q9HBJ7 922 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 KLHL11Q9NVR0 708 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 PCDHGA4Q9Y5G9 962 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 FBN2P35556 2912 aa14.23□□□□□ -0.13
EXOSC3-207ENST00000490516 C2CD3Q4AC94 2353 aa14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 RTN2O75298 545 aa14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 DRD3P35462 400 aa14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 HARS2P49590 506 aaKnown RBP14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 PDX1P52945 283 aa14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 ZNF177Q13360 481 aaPredicted RBP14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 ALCAMQ13740 583 aa14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 DRAP1Q14919 205 aaPredicted RBP14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 NCAPHQ15003 741 aa14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 PSMD6Q15008 389 aa14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 ZNF667Q5HYK9 610 aa14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 RSRC2Q7L4I2 434 aaKnown RBP14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 EFL1Q7Z2Z2 1120 aaKnown RBP14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 VASH2Q86V25 355 aa14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 STK40Q8N2I9 435 aa14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 PLD4Q96BZ4 506 aa14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 FUCA2Q9BTY2 467 aa14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 STRIP2Q9ULQ0 834 aa14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 DMTF1Q9Y222 760 aa14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 USP3Q9Y6I4 520 aa14.22□□□□□ -0.13
EXOSC3-207ENST00000490516 LRBAP50851 2863 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 UBE4BO95155 1302 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 CCDC187A0A096LP49 1063 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 PRAMEF26H0Y7S4 382 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 SCAMP1O15126 338 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 PHACTR2O75167 634 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 KIF20AO95235 890 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 ADH1BP00325 375 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 IL1BP01584 269 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 WT1P19544 449 aaPredicted RBP14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 C5AR1P21730 350 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 CSKP41240 450 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 CYP24A1Q07973 514 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 TRIP4Q15650 581 aaPredicted RBP14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 ZNF542PQ5EBM4 170 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 C14orf80Q86SX3 495 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 JAMLQ86YT9 394 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 TTC17Q96AE7 1141 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 VRTNQ9H8Y1 702 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 KIAA1586Q9HCI6 787 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 PNPLA8Q9NP80 782 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 EVA1BQ9NVM1 165 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 INTS6Q9UL03 887 aaKnown RBP14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 LIMCH1Q9UPQ0 1083 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 PLAAQ9Y263 795 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 CENPEQ02224 2701 aa14.21□□□□□ -0.13
EXOSC3-207ENST00000490516 TARSL2A2RTX5 802 aaKnown RBP14.2□□□□□ -0.14
EXOSC3-207ENST00000490516 TBL1XO60907 577 aa14.2□□□□□ -0.14
EXOSC3-207ENST00000490516 HOXD13P35453 343 aa14.2□□□□□ -0.14
EXOSC3-207ENST00000490516 LONP1P36776 959 aaKnown RBP14.2□□□□□ -0.14
EXOSC3-207ENST00000490516 CASRP41180 1078 aa14.2□□□□□ -0.14
EXOSC3-207ENST00000490516 CTSOP43234 321 aaPredicted RBP14.2□□□□□ -0.14
EXOSC3-207ENST00000490516 RIPPLY3P57055 190 aa14.2□□□□□ -0.14
EXOSC3-207ENST00000490516 ARID5BQ14865 1188 aa14.2□□□□□ -0.14
EXOSC3-207ENST00000490516 PERM1Q5SV97 790 aa14.2□□□□□ -0.14
EXOSC3-207ENST00000490516 RFWD3Q6PCD5 774 aa14.2□□□□□ -0.14
EXOSC3-207ENST00000490516 CYFIP2Q96F07 1278 aa14.2□□□□□ -0.14
EXOSC3-207ENST00000490516 EPSTI1Q96J88 318 aa14.2□□□□□ -0.14
EXOSC3-207ENST00000490516 LMLNQ96KR4 655 aa14.2□□□□□ -0.14
EXOSC3-207ENST00000490516 DUSP23Q9BVJ7 150 aa14.2□□□□□ -0.14
EXOSC3-207ENST00000490516 CALN1Q9BXU9 219 aa14.2□□□□□ -0.14
EXOSC3-207ENST00000490516 PCDHGA7Q9Y5G6 932 aa14.2□□□□□ -0.14
EXOSC3-207ENST00000490516 EDDM13A0A1B0GTR0 161 aa14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 NEMP2A6NFY4 417 aa14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 PLRG1O43660 514 aaKnown RBP14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 POU3F2P20265 443 aaPredicted RBP14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 MZF1P28698 734 aaPredicted RBP14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 NUDT1P36639 197 aa14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 CASP4P49662 377 aa14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 BIRC3Q13489 604 aa14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 SETMARQ53H47 684 aaPredicted RBP14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 MANEAQ5SRI9 462 aa14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 ADGRF1Q5T601 910 aa14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 TRIM69Q86WT6 500 aa14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 TMEM145Q8NBT3 493 aa14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 OR13H1Q8NG92 308 aa14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 KLK6Q92876 244 aa14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 TWNKQ96RR1 684 aa14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 PANK4Q9NVE7 773 aa14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 SLCO3A1Q9UIG8 710 aa14.19□□□□□ -0.14
EXOSC3-207ENST00000490516 STOML2Q9UJZ1 356 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms