RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 WBP2Q969T9 261 aa16.2■□□□□ 0.18
PCCB-218ENST00000490504 RNF25Q96BH1 459 aaPredicted RBP16.2■□□□□ 0.18
PCCB-218ENST00000490504 NCAPGQ9BPX3 1015 aa16.2■□□□□ 0.18
PCCB-218ENST00000490504 HERPUD2Q9BSE4 406 aa16.2■□□□□ 0.18
PCCB-218ENST00000490504 RAB17Q9H0T7 212 aa16.2■□□□□ 0.18
PCCB-218ENST00000490504 HOMER3Q9NSC5 361 aa16.2■□□□□ 0.18
PCCB-218ENST00000490504 POLR3BQ9NW08 1133 aaPredicted RBP16.2■□□□□ 0.18
PCCB-218ENST00000490504 OSER1Q9NX31 292 aa16.2■□□□□ 0.18
PCCB-218ENST00000490504 SCML2Q9UQR0 700 aa16.2■□□□□ 0.18
PCCB-218ENST00000490504 UTP11Q9Y3A2 253 aaKnown RBP16.2■□□□□ 0.18
PCCB-218ENST00000490504 RNF40O75150 1001 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 CYP17A1P05093 508 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 IL1R2P27930 398 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 MIPP30301 263 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 SDC4P31431 198 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 TNNT3P45378 269 aaPredicted RBP16.19■□□□□ 0.18
PCCB-218ENST00000490504 CARSP49589 748 aaKnown RBP16.19■□□□□ 0.18
PCCB-218ENST00000490504 LLGL1Q15334 1064 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 DHCR24Q15392 516 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 TAF5Q15542 800 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 HEATR6Q6AI08 1181 aaKnown RBP16.19■□□□□ 0.18
PCCB-218ENST00000490504 TTC27Q6P3X3 843 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 EMBQ6PCB8 327 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 MFSD7Q6UXD7 560 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 DDX42Q86XP3 938 aaKnown RBP eCLIP16.19■□□□□ 0.18
PCCB-218ENST00000490504 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.19■□□□□ 0.18
PCCB-218ENST00000490504 SEC14L1Q92503 715 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 HEMGNQ9BXL5 484 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 ZWILCHQ9H900 591 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 TLR8Q9NR97 1041 aaKnown RBP16.19■□□□□ 0.18
PCCB-218ENST00000490504 FRYLO94915 3013 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 ANAPC1Q9H1A4 1944 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 LRRD1A4D1F6 860 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 MAP2K7O14733 419 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 SLC9A3R1O14745 358 aaPredicted RBP16.19■□□□□ 0.18
PCCB-218ENST00000490504 TLR5O60602 858 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 SASH3O75995 380 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 TRUB2O95900 331 aaKnown RBP16.19■□□□□ 0.18
PCCB-218ENST00000490504 OPRD1P41143 372 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 PTGIRP43119 386 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 NNTQ13423 1086 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 CCDC14Q49A88 953 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 EFHC1Q5JVL4 640 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 RHBDF2Q6PJF5 856 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 JAMLQ86YT9 394 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 CLEC4CQ8WTT0 213 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 RAPGEF5Q92565 580 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 NMUR1Q9HB89 426 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 PNPLA8Q9NP80 782 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 NFU1Q9UMS0 254 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 USP18Q9UMW8 372 aa16.19■□□□□ 0.18
PCCB-218ENST00000490504 SMG5Q9UPR3 1016 aaKnown RBP16.19■□□□□ 0.18
PCCB-218ENST00000490504 A0A1W2PQH9 124 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 E2F8A0AVK6 867 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 TJP3O95049 919 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 CDKN2BP42772 138 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 PTPN9P43378 593 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 SLC6A11P48066 632 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 ADIGQ0VDE8 80 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 CASP8Q14790 479 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 C15orf59Q2T9L4 293 aaPredicted RBP16.18■□□□□ 0.18
PCCB-218ENST00000490504 TFDP3Q5H9I0 405 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 ANKS1BQ7Z6G8 1248 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 C1orf54Q8WWF1 131 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 SLCO2A1Q92959 643 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 CAVIN3Q969G5 261 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 EXOC4Q96A65 974 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 CFAP57Q96MR6 1250 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 ERP44Q9BS26 406 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 TRIM51Q9BSJ1 452 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 DCLK3Q9C098 648 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 NACA2Q9H009 215 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 LRRC4Q9HBW1 653 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 FAM114A2Q9NRY5 505 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 PCSK1NQ9UHG2 260 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 EFR3BQ9Y2G0 817 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 SH3BP1Q9Y3L3 701 aa16.18■□□□□ 0.18
PCCB-218ENST00000490504 hCG_1818297A0A087WSY0 165 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 ANTXRLA6NF34 631 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 C3orf70A6NLC5 250 aaPredicted RBP16.17■□□□□ 0.18
PCCB-218ENST00000490504 HRO43593 1189 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 PRPSAP2O60256 369 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 HSF2BPO75031 334 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 FBXO21O94952 628 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 IRF1P10914 325 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 SRSF5Q13243 272 aaKnown RBP16.17■□□□□ 0.18
PCCB-218ENST00000490504 CDO1Q16878 200 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 SMTNL2Q2TAL5 461 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 FBXO43Q4G163 708 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 SCD5Q86SK9 330 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 LONP2Q86WA8 852 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 BBS7Q8IWZ6 715 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 SIX6OS1Q8N1H7 587 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 RPLP0P6Q8NHW5 317 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 GRK7Q8WTQ7 553 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 FAM172AQ8WUF8 416 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 KLF16Q9BXK1 252 aaPredicted RBP16.17■□□□□ 0.18
PCCB-218ENST00000490504 UBXN6Q9BZV1 441 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 FAM53CQ9NYF3 392 aa16.17■□□□□ 0.18
PCCB-218ENST00000490504 TBC1D14Q9P2M4 693 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms