RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 A0A1B0GVL5 298 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 PIK3R2O00459 728 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 MYL1P05976 194 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 PRR29P0C7W0 189 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 GOT1P17174 413 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 CKMT2P17540 419 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 ACTN2P35609 894 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 TBX4P57082 545 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 PPP2CBP62714 309 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 PPP2CAP67775 309 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 CXADRP78310 365 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 INSM1Q01101 510 aaPredicted RBP14.47□□□□□ -0.09
VARS-227ENST00000489979 TLE3Q04726 772 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 FSCBQ5H9T9 825 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 PITRM1Q5JRX3 1037 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 KANSL1Q7Z3B3 1105 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 SPATS2Q86XZ4 545 aaKnown RBP14.47□□□□□ -0.09
VARS-227ENST00000489979 SPACA3Q8IXA5 215 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 STK40Q8N2I9 435 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 KDM1BQ8NB78 822 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 KCTD13Q8WZ19 329 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 RFFLQ8WZ73 363 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 AZIN2Q96A70 460 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 EEF2KMTQ96G04 330 aa14.47□□□□□ -0.09
VARS-227ENST00000489979 TENM4Q6N022 2769 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 ATMQ13315 3056 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 TBC1D3DA0A087WVF3 549 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 TBC1D3IA0A087WXS9 549 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 TBC1D3EA0A087X179 549 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 TBC1D3KA0A087X1G2 549 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 TYW5A2RUC4 315 aaKnown RBP14.46□□□□□ -0.09
VARS-227ENST00000489979 TBC1D3FA6NER0 549 aaPredicted RBP14.46□□□□□ -0.09
VARS-227ENST00000489979 TBC1D3LB9A6J9 549 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 RHOBTB3O94955 611 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 F13A1P00488 732 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 SRPRAP08240 638 aaKnown RBP14.46□□□□□ -0.09
VARS-227ENST00000489979 TBC1D3HP0C7X1 549 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 SETSIPP0DME0 302 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 ZSCAN22P10073 491 aaPredicted RBP14.46□□□□□ -0.09
VARS-227ENST00000489979 PFKFB1P16118 471 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 C5AR1P21730 350 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 RGS7P49802 495 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 MCCD1P59942 119 aaPredicted RBP14.46□□□□□ -0.09
VARS-227ENST00000489979 CFHR1Q03591 330 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 CUL2Q13617 745 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 CDH18Q13634 790 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 TBC1D25Q3MII6 688 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 TBC1D3GQ6DHY5 549 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 TBC1D3CQ6IPX1 549 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 NAPEPLDQ6IQ20 393 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 ERICH1Q86X53 443 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 TBC1D3Q8IZP1 549 aaPredicted RBP14.46□□□□□ -0.09
VARS-227ENST00000489979 CACTIN-AS1Q8N1I8 211 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 CFAP52Q8N1V2 620 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 SCML4Q8N228 414 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 MFSD2AQ8NA29 543 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 CCDC47Q96A33 483 aaKnown RBP14.46□□□□□ -0.09
VARS-227ENST00000489979 DDX50Q9BQ39 737 aaKnown RBP14.46□□□□□ -0.09
VARS-227ENST00000489979 NUCKS1Q9H1E3 243 aaKnown RBP14.46□□□□□ -0.09
VARS-227ENST00000489979 USP25Q9UHP3 1055 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 SLCO3A1Q9UIG8 710 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 RCOR1Q9UKL0 485 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 TPX2Q9ULW0 747 aaKnown RBP14.46□□□□□ -0.09
VARS-227ENST00000489979 CEP83Q9Y592 693 aa14.46□□□□□ -0.09
VARS-227ENST00000489979 ITIH6Q6UXX5 1313 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 O00370 1275 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 LATO43561 262 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 STX10O60499 249 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 GABBR2O75899 941 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 ADH1BP00325 375 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 IL1BP01584 269 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 VDRP11473 427 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 ACP1P24666 158 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 ECT2LQ008S8 904 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 DNM1Q05193 864 aaKnown RBP14.45□□□□□ -0.1
VARS-227ENST00000489979 PROX2Q3B8N5 592 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 PKDCCQ504Y2 493 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 ZCWPW2Q504Y3 356 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 ATL3Q6DD88 541 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.45□□□□□ -0.1
VARS-227ENST00000489979 PRPF39Q86UA1 669 aaKnown RBP14.45□□□□□ -0.1
VARS-227ENST00000489979 CCDC117Q8IWD4 279 aaPredicted RBP14.45□□□□□ -0.1
VARS-227ENST00000489979 GUF1Q8N442 669 aaKnown RBP14.45□□□□□ -0.1
VARS-227ENST00000489979 DCBLD1Q8N8Z6 715 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 CLEC4CQ8WTT0 213 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 IRGQQ8WZA9 623 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 PTPRN2Q92932 1015 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 RPL10LQ96L21 214 aaKnown RBP14.45□□□□□ -0.1
VARS-227ENST00000489979 LGMNQ99538 433 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 ARHGAP20Q9P2F6 1191 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 CFAP45Q9UL16 551 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 COL6A6A6NMZ7 2263 aa14.45□□□□□ -0.1
VARS-227ENST00000489979 J3QKU1 62 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 SDC3O75056 442 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 LUC7L3O95232 432 aaKnown RBP14.44□□□□□ -0.1
VARS-227ENST00000489979 MOCS3O95396 460 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 MT-CO3P00414 261 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 LTFP02788 710 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 EPB41P11171 864 aaKnown RBP14.44□□□□□ -0.1
VARS-227ENST00000489979 MZF1P28698 734 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms