RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 FRG1Q14331 258 aaKnown RBP8.71□□□□□ -1.02
VTI1A-207ENST00000489357 FASTKD3Q14CZ7 662 aaKnown RBP8.71□□□□□ -1.02
VTI1A-207ENST00000489357 PDK4Q16654 411 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 UPP1Q16831 310 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 PPP6R3Q5H9R7 873 aaPredicted RBP8.71□□□□□ -1.02
VTI1A-207ENST00000489357 FNBP1LQ5T0N5 605 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 UBAP2Q5T6F2 1119 aaKnown RBP8.71□□□□□ -1.02
VTI1A-207ENST00000489357 ACBD5Q5T8D3 534 aaPredicted RBP8.71□□□□□ -1.02
VTI1A-207ENST00000489357 ANKRD22Q5VYY1 191 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 WSCD1Q658N2 575 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 NCBP2-AS2Q69YL0 99 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 SLC24A5Q71RS6 500 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 FAM35AQ86V20 835 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 SLC26A11Q86WA9 606 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 LRRC6Q86X45 466 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 LRRC34Q8IZ02 419 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 SLC44A1Q8WWI5 657 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 HTR3CQ8WXA8 447 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 SPATA13Q96N96 652 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 GUCD1Q96NT3 240 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 TGS1Q96RS0 853 aaKnown RBP8.71□□□□□ -1.02
VTI1A-207ENST00000489357 PAFAH2Q99487 392 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 RAD9AQ99638 391 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 ADAM2Q99965 735 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 SYT15Q9BQS2 421 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 B3GNT5Q9BYG0 378 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 VPS11Q9H270 941 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 CXCL16Q9H2A7 254 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 TTYH1Q9H313 450 aaPredicted RBP8.71□□□□□ -1.02
VTI1A-207ENST00000489357 RNF19AQ9NV58 838 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 DNAJC17Q9NVM6 304 aaKnown RBP8.71□□□□□ -1.02
VTI1A-207ENST00000489357 HAUS2Q9NVX0 235 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 DDX43Q9NXZ2 648 aaKnown RBP8.71□□□□□ -1.02
VTI1A-207ENST00000489357 KLK14Q9P0G3 267 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 CTNNAL1Q9UBT7 734 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 YBX2Q9Y2T7 364 aaKnown RBP8.71□□□□□ -1.02
VTI1A-207ENST00000489357 ARL2BPQ9Y2Y0 163 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 HEY1Q9Y5J3 304 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 TCRBV9S1A1TA0A576 114 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 CFAP73A6NFT4 308 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 POC1B-GALNT4F8VUJ3 575 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 TMEM189-UBE2V1I3L0A0 370 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 ST8SIA5O15466 376 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 DNAJC8O75937 253 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-207ENST00000489357 KRT38O76015 456 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 ARHGEF15O94989 841 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 EOMESO95936 686 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 AMHP03971 560 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 INHBAP08476 426 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 ALADP13716 330 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 CA4P22748 312 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 RBL1P28749 1068 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 TKTP29401 623 aaKnown RBP8.7□□□□□ -1.02
VTI1A-207ENST00000489357 SERPINB6P35237 376 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 ADRA1BP35368 520 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 MLH1P40692 756 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 TKTL1P51854 596 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 DEUP1Q05D60 604 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 SEMA3BQ13214 749 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 MTA1Q13330 715 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 TUSC3Q13454 348 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 DPYSQ14117 519 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 PRKD1Q15139 912 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-207ENST00000489357 RAB30Q15771 203 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 PARP6Q2NL67 630 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 BBS9Q3SYG4 887 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 DCAF6Q58WW2 860 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 NUGGCQ68CJ6 796 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 RNF43Q68DV7 783 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 PM20D1Q6GTS8 502 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 FAM171BQ6P995 826 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 C1orf228Q6PIY5 440 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 KCNT2Q6UVM3 1135 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 DSTYKQ6XUX3 929 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 PAQR9Q6ZVX9 377 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 TRPM8Q7Z2W7 1104 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 SPATA21Q7Z572 469 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 TMCO2Q7Z6W1 182 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-207ENST00000489357 PRUNE1Q86TP1 453 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 OSTM1Q86WC4 334 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 CHSY1Q86X52 802 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 NPAS4Q8IUM7 802 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 TRIM42Q8IWZ5 723 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 C10orf67Q8IYJ2 551 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 DEFB106AQ8N104 65 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 THEM5Q8N1Q8 247 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 MEIOBQ8N635 442 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 GSDMBQ8TAX9 411 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 RAB3IL1Q8TBN0 382 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 FBF1Q8TES7 1133 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 RNF139Q8WU17 664 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 DCAKDQ8WVC6 231 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 FAM149B1Q96BN6 582 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 ZFP42Q96MM3 310 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 PWWP2AQ96N64 755 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 MED10Q9BTT4 135 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 ARHGEF4Q9NR80 690 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 KRT82Q9NSB4 513 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 DTLQ9NZJ0 730 aa8.7□□□□□ -1.02
VTI1A-207ENST00000489357 FNIP2Q9P278 1114 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms