RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 TFB1MQ8WVM0 346 aaKnown RBP11.81□□□□□ -0.52
C9orf3-220ENST00000489318 HTR3CQ8WXA8 447 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 RSAD2Q8WXG1 361 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 FATE1Q969F0 183 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 IGSF8Q969P0 613 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 PPP2R3CQ969Q6 453 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 WBP2Q969T9 261 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 TSGA13Q96PP4 275 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 PRDM12Q9H4Q4 367 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 TASP1Q9H6P5 420 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 TRPC7Q9HCX4 862 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 ARFGAP3Q9NP61 516 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 GKN1Q9NS71 199 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 AGO1Q9UL18 857 aaKnown RBP11.81□□□□□ -0.52
C9orf3-220ENST00000489318 SNX24Q9Y343 169 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 FARP1Q9Y4F1 1045 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-220ENST00000489318 TMEM265A0A087WTH1 108 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 CCDC195A0A1B0GUA6 201 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 C5orf60A6NFR6 353 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 SMAPO00193 183 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 KCNN4O15554 427 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 MTSS1O43312 755 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 GCATO75600 419 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 CKMP06732 381 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 WEE1P30291 646 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 RPL22P35268 128 aaKnown RBP11.8□□□□□ -0.52
C9orf3-220ENST00000489318 MAGEA6P43360 314 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 NDST2P52849 883 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 USP4Q13107 963 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 CALCOCO2Q13137 446 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 ALFQ53S48 1182 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 STXBP5Q5T5C0 1151 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 ADGRF1Q5T601 910 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 RNASEH2BQ5TBB1 312 aaKnown RBP11.8□□□□□ -0.52
C9orf3-220ENST00000489318 RNF43Q68DV7 783 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 HIBCHQ6NVY1 386 aaPredicted RBP11.8□□□□□ -0.52
C9orf3-220ENST00000489318 C4orf22Q6V702 233 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 HTR3DQ70Z44 454 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 CHST9Q7L1S5 443 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 RBM23Q86U06 439 aaKnown RBP11.8□□□□□ -0.52
C9orf3-220ENST00000489318 HOOK3Q86VS8 718 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 LRRC49Q8IUZ0 686 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 DENND1CQ8IV53 801 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 TP53INP2Q8IXH6 220 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 CPXM2Q8N436 756 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 MREGQ8N565 214 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 KIAA1958Q8N8K9 716 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 MAB21L3Q8N8X9 362 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 FAM71DQ8N9W8 422 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 FBXO25Q8TCJ0 367 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 TCEAL4Q96EI5 215 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 MYEOVQ96EZ4 313 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 CYP2S1Q96SQ9 504 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 LGMNQ99538 433 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 DDX50Q9BQ39 737 aaKnown RBP11.8□□□□□ -0.52
C9orf3-220ENST00000489318 HINFPQ9BQA5 517 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 SLC46A2Q9BY10 475 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 TRIM31Q9BZY9 425 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 ADAM7Q9H2U9 754 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 NSUN3Q9H649 340 aaKnown RBP11.8□□□□□ -0.52
C9orf3-220ENST00000489318 NOL6Q9H6R4 1146 aaKnown RBP11.8□□□□□ -0.52
C9orf3-220ENST00000489318 C10orf88Q9H8K7 445 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 NDFIP2Q9NV92 336 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 LMCD1Q9NZU5 365 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 MPP6Q9NZW5 540 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 PAK5Q9P286 719 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 SHOC2Q9UQ13 582 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 ZNF510Q9Y2H8 683 aa11.8□□□□□ -0.52
C9orf3-220ENST00000489318 NUP205Q92621 2012 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 A0A0A0MRY4 1105 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 GOLGA6L7A0A1B0GV03 622 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 ZNF197O14709 1029 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 CNTN5O94779 1100 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 GLP2RO95838 553 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 IFNB1P01574 187 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 ZSCAN5DPP0CG00 497 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 ETS1P14921 441 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 GJA1P17302 382 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 ADCY8P40145 1251 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 CDH4P55283 916 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 RBM10P98175 930 aaKnown RBP11.79□□□□□ -0.52
C9orf3-220ENST00000489318 WASHC5Q12768 1159 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 GPS1Q13098 491 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 CBLBQ13191 982 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 HLTFQ14527 1009 aaKnown RBP eCLIP11.79□□□□□ -0.52
C9orf3-220ENST00000489318 MORF4L2Q15014 288 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 TEAD2Q15562 447 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 TRIP13Q15645 432 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-220ENST00000489318 KCTD19Q17RG1 926 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-220ENST00000489318 LRIT3Q3SXY7 679 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 ARHGAP15Q53QZ3 475 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 RABGAP1LQ5R372 815 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 GPR158Q5T848 1215 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 IZUMO3Q5VZ72 239 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 PRUNE1Q86TP1 453 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 CMTM8Q8IZV2 173 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 LGI2Q8N0V4 545 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 EFHBQ8N7U6 833 aa11.79□□□□□ -0.52
C9orf3-220ENST00000489318 ZSCAN18Q8TBC5 510 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-220ENST00000489318 IFT81Q8WYA0 676 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms