RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 KRT20P35900 424 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.94■□□□□ 0.46
NPHP4-209ENST00000489180 MAMLD1Q13495 774 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 DMAP1Q9NPF5 467 aaPredicted RBP17.94■□□□□ 0.46
NPHP4-209ENST00000489180 STARD13Q9Y3M8 1113 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 KRT6AP02538 564 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 KRT6BP04259 564 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 KRT6CP48668 564 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 BOP1Q14137 746 aaKnown RBP17.94■□□□□ 0.46
NPHP4-209ENST00000489180 SNCAIPQ9Y6H5 919 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 VEGFAP15692 232 aaPredicted RBP17.94■□□□□ 0.46
NPHP4-209ENST00000489180 LRPAP1P30533 357 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 RPL14P50914 215 aaKnown RBP17.94■□□□□ 0.46
NPHP4-209ENST00000489180 XRCC4Q13426 336 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 C1DQ13901 141 aaKnown RBP17.94■□□□□ 0.46
NPHP4-209ENST00000489180 OVOS1Q6IE37 1185 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 TSHZ1Q6ZSZ6 1077 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 MILR1Q7Z6M3 343 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 MAP4K3Q8IVH8 894 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 SLC41A1Q8IVJ1 513 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 PHACTR4Q8IZ21 702 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 AKT1S1Q96B36 256 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 WDR41Q9HAD4 459 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 RPS6KB2Q9UBS0 482 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 KLHL3Q9UH77 587 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 CHKBQ9Y259 395 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 TRIM43BA6NCK2 446 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 DNAJB2P25686 324 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 PSMB4P28070 264 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 IL17AQ16552 155 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 GLT6D1Q7Z4J2 308 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 BRSK2Q8IWQ3 736 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 EMILIN2Q9BXX0 1053 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 MROH8Q9H579 483 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 USP32Q8NFA0 1604 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 LRRC10BA6NIK2 292 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 GTF2A2P52657 109 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 OR52K1Q8NGK4 314 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 ITFG1Q8TB96 612 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 OPTNQ96CV9 577 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 CIPCQ9C0C6 399 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 MMADHCQ9H3L0 296 aaPredicted RBP17.93■□□□□ 0.46
NPHP4-209ENST00000489180 RNPEPL1Q9HAU8 725 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 RAD51BO15315 384 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 ADRB2P07550 413 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 ALOX12P18054 663 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 CLK2P49760 499 aaKnown RBP17.93■□□□□ 0.46
NPHP4-209ENST00000489180 SLC26A2P50443 739 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 C21orf59P57076 290 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 USP39Q53GS9 565 aaKnown RBP17.93■□□□□ 0.46
NPHP4-209ENST00000489180 SPDYCQ5MJ68 293 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 ZFP1Q6P2D0 407 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 KYAT3Q6YP21 454 aaKnown RBP17.93■□□□□ 0.46
NPHP4-209ENST00000489180 DHRSXQ8N5I4 330 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 OR56A4Q8NGH8 313 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 RORBQ92753 470 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 SERAC1Q96JX3 654 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 DEPDC7Q96QD5 511 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 TKTL2Q9H0I9 626 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 TLR8Q9NR97 1041 aaKnown RBP17.93■□□□□ 0.46
NPHP4-209ENST00000489180 LMTK2Q8IWU2 1503 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 TRDMT1O14717 391 aaKnown RBP17.93■□□□□ 0.46
NPHP4-209ENST00000489180 ATP4AP20648 1035 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 TNFRSF8P28908 595 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 UBAP2LQ14157 1087 aaKnown RBP17.93■□□□□ 0.46
NPHP4-209ENST00000489180 ZDHHC17Q8IUH5 632 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 TAS2R13Q9NYV9 303 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 ZNF112Q9UJU3 913 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 ENTPD5O75356 428 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 ANKS6Q68DC2 871 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 HERC6Q8IVU3 1022 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 ZFPM1Q8IX07 1006 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 SAMD3Q8N6K7 520 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 ATP13A1Q9HD20 1204 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 KCND1Q9NSA2 647 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 BTBD7Q9P203 1132 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 ATP6V1HQ9UI12 483 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 RABGEF1Q9UJ41 708 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 TRHDEQ9UKU6 1024 aa17.93■□□□□ 0.46
NPHP4-209ENST00000489180 FAM220BPB1ANY3 271 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 CYP7B1O75881 506 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 KRT36O76013 467 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 GRIK3Q13003 919 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 TRIM71Q2Q1W2 868 aaKnown RBP17.92■□□□□ 0.46
NPHP4-209ENST00000489180 CCDC149Q6ZUS6 474 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 SPATC1LQ9H0A9 340 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 LIASO43766 372 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 PAEPP09466 180 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 EIF4BP23588 611 aaKnown RBP17.92■□□□□ 0.46
NPHP4-209ENST00000489180 PTDSS1P48651 473 aaKnown RBP17.92■□□□□ 0.46
NPHP4-209ENST00000489180 RENBPP51606 427 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 HK2P52789 917 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 IL27RAQ6UWB1 636 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 ARHGAP22Q7Z5H3 698 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 EPHX4Q8IUS5 362 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 SYTL1Q8IYJ3 562 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 DNERQ8NFT8 737 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 HGH1Q9BTY7 390 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 SPRTNQ9H040 489 aaPredicted RBP17.92■□□□□ 0.46
NPHP4-209ENST00000489180 LNPEPQ9UIQ6 1025 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms